Job Description P0AAI1 Confidence 100.00% Date Thu Jan 5 11:12:59 GMT 2012 Rank 46 Aligned Residues 203 % Identity 28% Template c2pzfB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:cystic fibrosis transmembrane conductance regulator; PDBTitle: minimal human cftr first nucleotide binding domain as a head-to-tail2 dimer with delta f508 Resolution 2.00 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		G	T	P	L	L	L	N	A	V	S	K	H	Y	.	.	A	E	N	I	V	L	N	Q	L	D	L	H	I	P	A	G	Q	F	V	A	V	V	G	R	S	G	G	G	K	S	T	L	L	R	L	L	A	G	L	E	T	P	T	A	G	D	V	L	A	G	T	T	P	L	A	E	I	Q	E	D	T	R	M	M	F
Query Conservation															.	.
Alig confidence															.	.																																																					.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.
Template Sequence		T	T	E	V	V	M	E	N	V	T	A	F	W	E	E	G	G	T	P	V	L	K	D	I	N	F	K	I	E	R	G	Q	L	L	A	V	A	G	S	T	G	A	G	K	T	S	L	L	M	M	I	M	G	E	L	E	P	S	E	G	K	I	K	H	S	G	R	.	.	.	.	.	.	.	.	I	S	F	C	S
Template Known Secondary structure														S	S	T	T	S			S										T	T								S	T	T	S	S									T	T	S	S			S								S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.
Template SS confidence
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.									.	.	.	.	460
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.										.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.
Query Sequence		Q	D	A	R	L	L	P	W	K	S	V	I	D	N	V	G	L	.	.	.	.	.	.	.	.	.	G	L	K	G	Q	W	R	D	A	A	R	R	A	L	A	A	V	G	L	E	N	R	A	G	E	W	P	A	A	L	S	G	G	Q	K	Q	R	V	A	L	A	R	A	L	I	H	R	P	G	L	L	L	L	D
Query Conservation																			.	.	.	.	.	.	.	.	.
Alig confidence										.									.	.	.	.	.	.	.	.	.
Template Conservation										.
Template Sequence		Q	F	S	W	I	M	P	G	.	T	I	K	E	N	I	I	G	V	S	Y	D	E	Y	R	Y	R	S	V	I	K	A	C	Q	L	E	E	D	I	S	K	F	A	E	K	D	N	I	V	L	G	E	G	G	I	T	L	S	G	G	Q	R	A	R	I	S	L	A	R	A	V	Y	K	D	A	D	L	Y	L	L	D
Template Known Secondary structure		T	T					S		.								T	T														T	T						T	T	S	T	T	G	G	G					T	T		T	T	S																S			S
Template Predicted Secondary structure										.
Template SS confidence
		493	.	.	.	.	.	.	500		.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	L	G	A	L	D	A	L	T	R	L	E	M	Q	D	L	I	V	S	L	W	Q	E	H	G	F	T	V	L	L	V	T	H	D	V	S	E	A	V	A	M	A	D	R	V	L	L	I	E	E	G	K	I	G	L	D	L	T	V	D	I	P	R	P
Query Conservation
Alig confidence																							.																			.
Template Conservation																							.																			.
Template Sequence		S	P	F	G	Y	L	D	V	L	T	E	K	E	I	F	E	S	C	V	C	K	.	L	M	A	N	K	T	R	I	L	V	T	S	K	M	E	H	L	K	.	K	A	D	K	I	L	I	L	H	E	G	S	S	Y	F	Y	G	T	F	S	E	L	Q	N
Template Known Secondary structure		S	T	T	T	T	S																.		T	T	T	S														.			S							T	T
Template Predicted Secondary structure																							.																			.
Template SS confidence
		573	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.		.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.		.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions