Job Description P0AAI1 Confidence 100.00% Date Thu Jan 5 11:12:59 GMT 2012 Rank 52 Aligned Residues 210 % Identity 24% Template c2ghiD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:transport protein; PDBTitle: crystal structure of plasmodium yoelii multidrug resistance2 protein 2 Resolution 2.20 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.						.	80	.
Predicted Secondary structure																																																																										.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.
Query Sequence		N	Q	G	T	P	L	L	L	N	A	V	S	K	H	Y	A	E	N	I	V	L	N	Q	L	D	L	H	I	P	A	G	Q	F	V	A	V	V	G	R	S	G	G	G	K	S	T	L	L	R	L	L	A	G	L	E	T	P	T	A	G	D	V	L	A	G	T	T	P	L	A	E	I	.	.	.	.	.	Q	E	D
Query Conservation																																																																										.	.	.	.	.
Alig confidence																			.	.																																								.														.	.	.	.	.
Template Conservation																			.	.																																								.
Template Sequence		K	F	G	V	N	I	E	F	S	D	V	N	F	S	Y	H	R	.	.	T	L	K	S	I	N	F	F	I	P	S	G	T	T	C	A	L	V	G	H	T	G	S	G	K	S	T	I	A	K	L	L	Y	R	F	Y	D	A	E	.	G	D	I	K	I	G	G	K	N	V	N	K	Y	N	R	N	S	I	R	S	I
Template Known Secondary structure		T	T																.	.	S										T	T								S	T	T	S	S									T	T	S	S				.						T	T			G	G	G	S							T	T
Template Predicted Secondary structure																			.	.																																								.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.
Query Sequence		T	R	M	M	F	Q	D	A	R	L	L	P	W	K	S	V	I	D	N	V	G	L	G	L	K	G	Q	W	R	D	A	A	R	R	A	L	A	A	V	G	L	E	N	R	A	G	E	.	.	.	.	.	W	P	A	A	L	S	G	G	Q	K	Q	R	V	A	L	A	R	A	L	I	H	R	P	G	L	L	L	L
Query Conservation																																																	.	.	.	.	.
Alig confidence															.																																		.	.	.	.	.
Template Conservation															.
Template Sequence		I	G	I	V	P	Q	D	T	I	L	F	N	E	.	T	I	K	Y	N	I	L	Y	G	K	L	D	A	T	D	E	E	V	I	K	A	T	K	S	A	Q	L	Y	D	F	I	E	A	L	P	K	K	W	D	T	I	V	L	S	G	G	E	R	Q	R	I	A	I	A	R	C	L	L	K	D	P	K	I	V	I	F
Template Known Secondary structure							S	S					S	S	.	B							T	T	S	T	T													T	T								S	T	T	G	G	G		B																		T			S
Template Predicted Secondary structure															.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	P	L	G	A	L	D	A	L	T	R	L	E	M	Q	D	L	I	V	S	L	W	Q	E	H	G	F	T	V	L	L	V	T	H	D	V	S	E	A	V	A	M	A	D	R	V	L	L	I	E	E	G	K	I	G	L	D	L	T	V	D	I	P	R	P	R	R	L	G	S	V	R	L	A	E
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.																									.
Template Sequence		D	D	S	K	T	.	.	.	.	.	.	.	.	.	.	.	E	Y	L	F	Q	K	A	V	E	D	N	R	T	L	I	I	I	A	H	R	L	S	T	I	.	S	S	A	E	S	I	I	L	L	N	K	G	K	I	V	E	K	G	T	H	K	D	L	L	K	L	N	G	E	Y	A	E	M	W	N
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.																			S	S	G	G	G	S	.	T	T		S							T	T															T	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.																									.
Template SS confidence
		180	.	.	.	.												.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions