Job Description P0AAI1 Confidence 97.07% Date Thu Jan 5 11:12:59 GMT 2012 Rank 169 Aligned Residues 107 % Identity 14% Template c1sxjA_ PDB info
PDB header: replicationChain: A: PDB Molecule: activator 1 95 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna)
Resolution 2.85 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
38 . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . .
Predicted Secondary structure
Query SS confidence
Query Sequence
Q F V A V V G R S G G G K S T L L R L L A G L E T P T A G D V L A G T T P L A E I Q E D T R M M F Q D A R L L P W K S V I D N V G L G L K G Q W R D A A R R A L
Query Conservation
Alig confidence
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Template Conservation
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Template Sequence
R A A M L Y G P P G I G K T T A A H L V A Q E L G Y .
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D I L E Q N A S
Template Known Secondary structure
S S T T S S T T . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . T T
Template Predicted Secondary structure
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Template SS confidence
347 . . 350 . . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380
118 . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . .
Predicted Secondary structure
Query SS confidence
Query Sequence
A A V G L E N R A G E W P A A L S G G Q K Q R V A L A R A L I H R P G L L L L D E P L G A L D A L T R L E M Q D L I V S L W Q E H G F T V L L V T H D
Query Conservation
Alig confidence
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Template Conservation
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Template Sequence
D V R S K T L L N A G V K N A L D N M S V V G Y F K H Q N L N G K H F V I I M D E V D G M S .
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G G D R G G V G Q L A Q F C R K T S T P L I L I C N E
Template Known Secondary structure
S T G G G G T T S T T T T T S S T T S S G G G . . T T S T T S S S
Template Predicted Secondary structure
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Template SS confidence
381 . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420 . . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . .
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre serverKelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
