 |
Job Description | P06134 | Confidence | 98.51% | Date | Thu Jan 5 10:59:04 GMT 2012 |
Rank | 25 | Aligned Residues | 49 |
% Identity | 31% | Template | d1d5ya1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| AraC type transcriptional activator
|
Resolution | 2.70 |
|
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | K | I | T | H | A | C | R | L | L | E | Q | E | . |
. |
T | P | V | T | L | E | A | L | A | D | Q | V | A | M | S | P | F | H | L | H | R | L | F | K | A | T | T | G | M | T | P | K | A | W | Q | Q |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |
|
|   |   | . | . |   |   |   |
|
|   |   |
|
|   |   |
|
|   |
|   |   |   |
|   |
|   |
|
|   |   |   |
|   |
|
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |
|
|   |   |   |
|   |
|
|   |   |
|
|   |
Template Sequence |   |
G | I | I | R | D | L | L | I | W | L | E | G | H | L | D | Q | P | L | S | L | D | N | V | A | A | K | A | G | Y | S | K | W | H | L | Q | R | M | F | K | D | V | T | G | H | A | I | G | A | Y | I | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S | S |
|
|
|  |  |  |  | T | T | T | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  | S | S |
|  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|