Return to main results Retrieve Phyre Job Id

Job DescriptionP06134
Confidence80.85%DateThu Jan 5 10:59:04 GMT 2012
Rank70Aligned Residues40
% Identity13%Templatec3r4kD_
PDB info PDB header:dna binding proteinChain: D: PDB Molecule:transcriptional regulator, iclr family; PDBTitle: crystal structure of a putative iclr transcriptional regulator2 (tm1040_3717) from silicibacter sp. tm1040 at 2.46 a resolution
Resolution2.46 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   83......90.... .....100.........110.........120..
Predicted Secondary structure  .








Query SS confidence 











.



























Query Sequence  RLDKITHACRLL. EQETPVTLEALADQVAMSPFHLHRLFKA
Query Conservation      
   
  
.
     

  

  

 
   
 
 

 
Alig confidence 











.



























Template Conservation 

 
 
 


 

      

 


  


  

  


 
Template Sequence  TVSKALTLLTYFNHGRLEIGLSDLTRLSGXNKATVYRLXSE
Template Known Secondary structure  TT
BTTBS

S
Template Predicted Secondary structure 










Template SS confidence 








































   3......10.........20.........30.........40...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions