Job Description P06134 Confidence 69.75% Date Thu Jan 5 10:59:04 GMT 2012 Rank 178 Aligned Residues 68 % Identity 12% Template c3iwfA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcription regulator rpir family; PDBTitle: the crystal structure of the n-terminal domain of a rpir2 transcriptional regulator from staphylococcus epidermidis to 1.4a Resolution 1.40 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	K	R	C	Q	P	E	K	A	N	A	Q	Q	H	R	L	D	K	I	T	H	A	C	R	L	L	E	Q	E	T	P	V	T	L	E	A	L	A	D	Q	V	A	M	S	P	F	H	L	H	R	L	F	K	A	T	T	G	M	T	P	K	A	W	Q	Q	A	W	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	K	I	D	N	Q	Y	P	Y	F	T	K	N	E	K	K	I	A	Q	F	I	L	N	Y	P	H	K	V	V	N	X	T	S	Q	E	I	A	N	Q	L	E	T	S	S	T	S	I	I	R	L	S	K	K	V	T	P	G	G	F	N	E	L	K	T	R	L	S
Template Known Secondary structure									G	G	G	S																			T	T											T	S													S	T	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions