Return to main results Retrieve Phyre Job Id

Job DescriptionP06134
Confidence64.73%DateThu Jan 5 10:59:04 GMT 2012
Rank242Aligned Residues42
% Identity17%Templatec2qkoA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:possible transcriptional regulator, tetr family protein; PDBTitle: crystal structure of transcriptional regulator rha06399 from2 rhodococcus sp. rha1
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   80.........90....... ..100.........110.........120.
Predicted Secondary structure 




..






Query SS confidence 

















. .























Query Sequence  QQHRLDKITHACRLLEQE. . TPVTLEALADQVAMSPFHLHRLFK
Query Conservation         
   
  

  ..   

  

  

 
   
 
 

Alig confidence 

















..























Template Conservation 



  

 

  
    
    
   

  



    
  
 
Template Sequence  PERRAALVNAAIEVLAREGARGLTFRAVDVEANVPKGTASNYFP
Template Known Secondary structure 
T
TTT

SSSTTT

S
Template Predicted Secondary structure 














Template SS confidence 











































   5....10.........20.........30.........40........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions