Job Description P06134 Confidence 66.33% Date Thu Jan 5 10:59:04 GMT 2012 Rank 212 Aligned Residues 92 % Identity 8% Template c1u78A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna Resolution 2.69 Å

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.									.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.
Query Sequence		P	E	K	A	N	A	Q	Q	H	R	L	D	K	I	T	H	A	C	R	L	L	E	Q	E	T	P	V	T	L	E	A	L	A	D	Q	V	A	M	S	P	F	H	L	H	R	L	F	K	A	T	T	.	.	.	.	.	.	.	.	G	M	T	P	K	A	W	Q	Q	A	W	R	A	R	R	L	R	E	S	L	A
Query Conservation																																																					.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.																													.	.	.	.	.	.	.	.							.	.
Template Conservation																				.	.	.	.	.																																											.	.
Template Sequence		P	R	G	S	A	L	S	D	T	E	R	A	Q	L	D	V	M	K	.	.	.	.	.	L	L	N	V	S	L	H	E	M	S	R	K	I	S	R	S	R	H	C	I	R	V	Y	L	K	D	P	V	S	Y	G	T	S	K	R	A	P	R	R	K	A	L	.	.	S	V	R	D	E	R	N	V	I	R	A	A	S
Template Known Secondary structure				S																.	.	.	.	.		T	T											T												S	G	G	G	T	T										S	S	.	.
Template Predicted Secondary structure																				.	.	.	.	.																																											.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.						20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.
		146	.	.		.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure					.													.
Query SS confidence					.													.
Query Sequence		K	G	E	.	S	V	T	T	S	I	L	N	A	G	F	P	.	D	S	S	S	Y	Y	R	K	A	D	E	T
Query Conservation					.													.
Alig confidence					.													.
Template Conservation
Template Sequence		N	S	C	K	T	A	R	D	I	R	N	E	L	Q	L	S	A	S	K	R	T	I	L	N	V	I	K	R	S
Template Known Secondary structure														T	T			S												T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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