Job Description P06134 Confidence 100.00% Date Thu Jan 5 10:59:04 GMT 2012 Rank 4 Aligned Residues 140 % Identity 34% Template c1t39A_ PDB info PDB header:transferase/dna Chain: A: PDB Molecule:methylated-dna--protein-cysteine PDBTitle: human o6-alkylguanine-dna alkyltransferase covalently2 crosslinked to dna Resolution 3.30 Å

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		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		V	R	Y	A	L	A	D	C	E	L	G	R	C	L	V	A	E	S	E	R	G	I	C	A	I	L	L	G	D	D	D	A	T	L	I	S	E	L	Q	Q	M	F	P	A	A	D	N	A	P	A	D	L	M	F	Q	Q	H	V	R	E	V	I	A	S	L	N	Q	R	D	T	P	L	T	L	P	L	D	I	.	.
Query Conservation																																																																																.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	R	T	T	L	D	S	P	L	G	K	L	E	L	S	G	C	E	Q	G	L	H	E	I	K	L	L	G	P	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	M	Q	C	T	A	W	L	N	A	Y	F	H	Q	P	E	A	I	E	E	F	P	V	P	A	L	H
Template Known Secondary structure										T	T				B					T	T						B							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															G	G	G	G	G	G	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																						.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
							267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	R	G	T	A	F	Q	Q	Q	V	W	Q	A	L	R	T	I	P	C	G	E	T	V	S	Y	Q	Q	L	A	N	A	I	G	K	P	K	A	V	R	A	V	A	S	A	C	A	A	N	K	L	A	I	I	I	P	C	H	R	V	V	R	G	D	G	T	L	S	G	Y	R	W	G	V	S	R	K
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		H	P	V	F	Q	Q	E	S	F	T	R	Q	V	L	W	K	L	L	K	V	V	K	F	G	E	V	I	S	Y	Q	Q	L	A	A	L	A	G	N	P	K	A	A	R	A	V	G	G	A	M	R	G	N	P	V	P	I	L	I	P	C	H	R	V	V	C	S	S	G	A	V	G	N	Y	S	G	G	L	A	V	K
Template Known Secondary structure		S					S														T	S		T	T												T	S		T	T		S									T		S	S	B	T	T	B		T	T	S				T	T	S						T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		342	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	L	L	R	R	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	W	L	L	A	H	E	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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