Job Description P06134 Confidence 54.67% Date Thu Jan 5 10:59:04 GMT 2012 Rank 320 Aligned Residues 54 % Identity 13% Template c1r71B_ PDB info PDB header:transcription/dna Chain: B: PDB Molecule:transcriptional repressor protein korb; PDBTitle: crystal structure of the dna binding domain of korb in2 complex with the operator dna Resolution 2.20 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	N	A	S	E	A	L	A	A	G	F	R	P	C	K	R	C	Q	P	E	K	A	N	A	Q	Q	H	R	L	D	K	I	T	H	A	C	R	L	L	E	Q	E	T	P	V	T	L	E	A	L	A	D	Q	V	A	M	S	P	F	H	L	H	R	L	F	K
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Sequence		Y	N	E	A	D	Q	V	I	E	N	.	.	.	.	.	.	.	.	.	.	.	L	Q	R	N	E	L	T	P	R	E	I	A	D	F	I	G	R	E	L	A	K	G	.	.	K	K	K	G	D	I	A	K	E	I	G	K	S	P	A	F	I	T	Q	H	V	T
Template Known Secondary structure												.	.	.	.	.	.	.	.	.	.	.			T	T																	T	T	.	.										T	T											G
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.																							.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.												.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions