Return to main results Retrieve Phyre Job Id

Job DescriptionP06134
Confidence28.77%DateThu Jan 5 10:59:04 GMT 2012
Rank447Aligned Residues41
% Identity24%Templatec1l0oC_
PDB info PDB header:protein bindingChain: C: PDB Molecule:sigma factor; PDBTitle: crystal structure of the bacillus stearothermophilus anti-2 sigma factor spoiiab with the sporulation sigma factor3 sigmaf
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   83......90...... ...100.........110.........120...
Predicted Secondary structure 
..







Query SS confidence 













. .


























Query Sequence  RLDKITHACRLLEQ. . ETPVTLEALADQVAMSPFHLHRLFKAT
Query Conservation      
   
  

 ..    

  

  

 
   
 
 

  
Alig confidence 













..


























Template Conservation     

  
   
   


 

 



  
 
  


  

 
 
Template Sequence  MGNKIRKAKDELSKTRGRAPTVTEIADHLGISPEDVVLAQEAV
Template Known Secondary structure  TS


TS
Template Predicted Secondary structure 







Template SS confidence 










































   114.....120.........130.........140.........150......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions