 |
Job Description | P0ADH7 | Confidence | 9.29% | Date | Thu Jan 5 11:21:01 GMT 2012 |
Rank | 70 | Aligned Residues | 48 |
% Identity | 10% | Template | d1sfka_ |
SCOP info | Flavivirus capsid protein C
| Flavivirus capsid protein C
| Flavivirus capsid protein C
|
Resolution | 3.20 |
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | G | K | E | V | Q | A | M | M | Q | A | V | C | Y | G | A | T | G | A | R | D | . |
Y | C | L | I | L | L | A | Y | R | H | G | M | R | I | S | E | L | L | D | L | H | Y | Q | D | L | D |
Query Conservation |   |
|
|   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   | . |   |   |
|   |   |
|   |   |   |
|
|
|
|   |   |
|   |   |   |
|   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|   |   |   |   |
|
|   |
|   |
|
|   |
|
|
|
|
|   |
|
|
|   |
|
|
|
|
|   |
|
|
|
|   |   |   |
|
|   |
|
|
|
Template Sequence |   |
L | S | L | T | G | L | K | R | A | M | L | S | L | I | D | G | R | G | P | T | R | F | V | L | A | L | L | A | F | F | R | F | T | A | I | A | P | T | R | A | V | L | D | R | W | R | S | V | N |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|  |  |  |  |  |  |  | T | T | S |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|