Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADH7
Confidence99.94%DateThu Jan 5 11:21:01 GMT 2012
Rank3Aligned Residues164
% Identity16%Templated1aiha_
SCOP infoDNA breaking-rejoining enzymes DNA breaking-rejoining enzymes Lambda integrase-like, catalytic core
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDERE
Query Conservation   
 
 

  
   

          
   
  
   



  
   
   

        
                   
Alig confidence 




















.






























..
























Template Conservation   
   

 


  

      .          
   

 
  

  
    
 ..         
      


      
Template Sequence  TELAFLYERDIYRLLAECDNS. RNPDLGLIVRICLATGARWSEAETLTQSQVM. . PYKITFTNTKSKKNRTVPISDELFD
Template Known Secondary structure 






TTS.SSTT


T
BTTT..TTSSSSS


Template Predicted Secondary structure 







.







..










Template SS confidence 















































































   169170.........180......... 190.........200.........210.........220 .........230.........240.....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  AVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLG
Query Conservation                                                           
   

     
     
   

Alig confidence 




....................






















































Template Conservation   
   ....................                             
 



 

     
     
   

Template Sequence  MLPKK. . . . . . . . . . . . . . . . . . . . RGRLFNDAYESFENAVLRAEIELPKGQLTHVLRHTFASHFMMNGGNILVLKEILG
Template Known Secondary structure  S


....................SSBSS


TT



TT
TTTTT

T
Template Predicted Secondary structure  ....................




















Template SS confidence 















































































   246...250 .........260.........270.........280.........290.........300.....
 
   162.......170.........180........
Predicted Secondary structure 




Query SS confidence 


























Query Sequence  HRNIRHTVRYTASNAARFAGLWERNNL
Query Conservation 

   

  
       
     
   
Alig confidence 


























Template Conservation 


   
  
          
      
Template Sequence  HSTIEMTMRYAHFAPSHLESAVKFNPL
Template Known Secondary structure 
SSGGGGGGS


TTSTT
Template Predicted Secondary structure 







Template SS confidence 


























   306...310.........320.........330..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions