|   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | |
|
|
|
. | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | K | E | V | Q | A | M | M | Q | A | V | C | Y | . |
. |
. |
. |
G | A | T | G | A | R | D | Y | C | L | I | L | L | A | Y | R | H | G | M | R | I | S | E | L | L | D | L | H | Y | Q | D | L | D | L | N | E | G | R | I | N | I | R | R | L | K | N | G | F | . |
. |
. |
. |
. |
S | T | V | H | P | L | R | F | D | E |
Query Conservation |   |
  |   |
|   |   |   |
|
|   |   |   |   |   | . | . | . | . |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|
|
|   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|
|
|
|
|
|   |
|
|
Template Sequence |   |
M | Q | A | I | Y | D | I | I | N | K | P | I | V | S | F | D | L | T | T | R | R | G | M | A | P | L | A | F | A | L | A | A | L | S | G | R | R | M | I | E | I | M | L | Q | G | E | F | S | V | A | G | K | Y | T | V | T | F | L | G | Q | A | K | K | R | S | E | D | K | G | I | S | R | K | I | Y | T | L | C | D | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | S |
| G | G | G | S |
|
| S | S | T | G | G | G |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | T | T |
|  |  |  |  |
| S | S | S |  |  |  |  |  |
|
| T | T |
|
|
|
| S |
|
|
|  |  |  |  |  |
| S | S |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
239 | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . |
  |
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
Query Sequence |   |
R | E | A | V | E | R | W | T | Q | E | R | A | N | W | K | G | A | D | R | T | . |
. |
. |
. |
. |
D | A | I | F | I | S | R | R | G | S | R | L | S | R | Q | Q | A | Y | R | I | I | R | D | A | G | I | E | A | G | T | V | T | Q | T | H | P | H | M | L | R | H | A | C | G | Y | E | L | A | E | . |
. |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
Template Conservation |   |
  |
|
|
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |
|
Template Sequence |   |
T | L | F | V | S | L | V | N | E | L | R | S | C | P | A | A | A | D | F | D | E | V | I | K | G | Y | G | E | N | D | T | R | S | E | N | G | R | I | N | A | I | L | A | T | A | F | N | P | W | V | K | T | F | L | G | D | D | R | R | V | Y | K | D | S | R | A | I | Y | A | R | I | A | Y | E | M | F | F | R | V | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T | S | G | G | G | T | T |  |  |  |  | T | T |
| S | S | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S | S |
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
319 | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
149 | 150 | . | . | . | . | . | |
. | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
Predicted Secondary structure |   |
. | . | . |
|
|
|
|  |  |  | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
R | G | A | D | T | R | L | . |
I | Q | D | Y | L | G | H | R | N | I | R | H | T | V | R | Y |
Query Conservation |   |
. | . | . |   |
|   |   |   |   |   | . |
|   |   |   |
|
|
|
|   |   |   |
|
|   |   |
|
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |   |   |
|   |
|   |
|   |
|
|
|
|   |
|
|
|
|
|   |
|
|
Template Sequence |   |
P | R | W | K | N | V | D | E | D | V | F | F | M | E | I | L | G | H | D | D | E | N | T | Q | L | H | Y |
Template Known Secondary structure |   |
G | G | G | T | T | S |
|  |  |  |  |  |  |  |  |  | T |
| S | S | T | T | G | G | G | S | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
399 | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . |
  |