Job Description P0ADH7 Confidence 99.63% Date Thu Jan 5 11:21:01 GMT 2012 Rank 12 Aligned Residues 154 % Identity 27% Template c2a3vA_ PDB info PDB header:recombination Chain: A: PDB Molecule:site-specific recombinase inti4; PDBTitle: structural basis for broad dna-specificity in integron2 recombination Resolution 2.80 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		G	A	T	G	A	R	D	Y	C	L	I	L	L	A	Y	R	H	G	M	R	I	S	E	L	L	D	L	H	Y	Q	D	L	D	L	N	E	G	R	I	N	I	R	R	L	K	N	G	F	S	T	V	H	P	L	R	F	D	E	R	E	A	V	E	R	W	T	Q	E	R	A	N	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence																																																																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	I	V	D	P	K	H	Q	L	P	I	K	L	L	Y	G	S	G	L	R	L	M	E	C	M	R	L	R	V	Q	D	I	D	F	D	Y	G	A	I	R	I	W	Q	G	K	G	G	K	N	R	T	V	T	L	A	K	E	L	Y	P	H	L	K	E	Q	I	A	L	A	K	R	Y	Y	D	R	D	L	H	Q	K
Template Known Secondary structure		T	S	S														S									T		B	G	G	G			T	T	T	T								T	T	T									G	G	G																			T	S		T
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
																														93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	K	G	A	D	R	T	D	A	I	F	I	S	R	R	G	S	R	L	S	R	Q	Q	A	Y	R	I	I	R	D	A	G	I	E	A	G	T	V	T	Q	T	H	P	H	M	L	R	H	A	C	G	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	Y	G	G	V	W	L	P	T	A	L	K	E	K	Y	P	N	A	P	Y	E	F	R	W	H	Y	L	F	P	S	F	Q	L	S	L	D	P	E	S	D	V	M	R	R	H	H	M	N	E	T	V	L	Q	K	A	V	R	R	S	A	Q	E	A	G	I	E	K	T	V	T	C	H	T	L	R	H	S	F	A	T
Template Known Secondary structure		T	B			S			S	T	T		T	T	T	S	T	T	G	G	G		G	G	G	S	B	S	S	B		S	S					T	T	T	T						B																T	T				S
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	E	R	G	A	D	T	R	L	I	Q	D	Y	L	G	H	R	N	I	R	H	T	V	R	Y	T	A	S	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	L	L	E	V	G	A	D	I	R	T	V	Q	E	Q	L	G	H	T	D	V	K	T	T	Q	I	Y	T	H	S	G
Template Known Secondary structure						T	T											T		S	S					G	G	G
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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