Job Description P0ADH7 Confidence 12.46% Date Thu Jan 5 11:21:01 GMT 2012 Rank 54 Aligned Residues 144 % Identity 12% Template c1p4eB_ PDB info PDB header:dna binding protein/recombination/dna Chain: B: PDB Molecule:recombinase flp protein; PDBTitle: flpe w330f mutant-dna holliday junction complex Resolution 2.70 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.								.	60	.	.	.	.	.	.	.	.	.	70	.							.	.	.
Predicted Secondary structure																					.	.	.	.																													.	.	.	.	.	.	.														.	.	.	.	.	.
Query SS confidence																					.	.	.	.																													.	.	.	.	.	.	.														.	.	.	.	.	.
Query Sequence		V	Q	A	M	M	Q	A	V	C	Y	G	A	T	G	A	R	D	Y	C	.	.	.	.	L	I	L	L	A	Y	R	H	G	M	R	I	S	E	L	L	D	L	H	Y	Q	D	L	D	L	N	E	G	.	.	.	.	.	.	.	R	I	N	I	R	R	L	K	N	G	F	S	T	.	.	.	.	.	.	V	H	P
Query Conservation																					.	.	.	.																													.	.	.	.	.	.	.														.	.	.	.	.	.
Alig confidence																					.	.	.	.																													.	.	.	.	.	.	.														.	.	.	.	.	.
Template Conservation
Template Sequence		T	E	K	I	L	N	S	F	E	Y	T	S	R	F	T	K	T	K	T	L	Y	Q	F	L	F	L	A	T	F	I	N	C	G	R	F	S	D	I	K	N	V	D	P	K	S	F	K	L	V	Q	N	K	Y	L	G	V	I	I	Q	C	L	V	T	E	T	K	T	S	V	S	R	H	I	Y	F	F	S	A	R	G
Template Known Secondary structure									T	T	T	T		S	S																		T								T	B		G	G	G							T	T	T										S		T	T	S											S	S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.						.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.							.
Query SS confidence																						.	.	.	.	.							.
Query Sequence		L	R	F	D	E	R	E	A	V	E	R	W	T	Q	E	R	A	N	W	K	.	.	.	.	.	G	A	D	R	T	D	.	A	I	F	I	S	R	R	G	S	R	L	S	R	Q	Q	A	Y	R	I	I	R	D	A	G	I	E	A	G	T	V	T	Q	T	H	P	H	M	L	R	H	A	C	G	Y	E	L	A	E
Query Conservation																						.	.	.	.	.							.
Alig confidence																						.	.	.	.	.							.
Template Conservation
Template Sequence		R	I	D	P	L	V	Y	L	D	E	F	L	R	N	S	E	P	V	L	K	R	V	N	R	T	G	N	S	S	S	N	K	Q	E	Y	Q	L	L	K	D	N	L	V	R	S	Y	N	K	A	L	K	K	N	A	P	Y	P	I	F	A	I	K	N	G	P	K	S	H	I	G	R	H	L	M	T	S	F	L	S	M
Template Known Secondary structure		S												T	T										B	S					S	S			S			S	S		T	T												T		S	S	G	G	G	G	S	T	T			S	T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		149	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	A	D	T	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	L	T	E	L	T
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions