Job Description P0ADH7 Confidence 99.80% Date Thu Jan 5 11:21:01 GMT 2012 Rank 10 Aligned Residues 186 % Identity 15% Template c1crxA_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:cre recombinase; PDBTitle: cre recombinase/dna complex reaction intermediate i Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.							.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																					.	.																																											.	.	.	.	.	.
Query SS confidence																					.	.																																											.	.	.	.	.	.
Query Sequence		S	K	R	R	Y	L	T	G	K	E	V	Q	A	M	M	Q	A	V	C	.	.	Y	G	A	T	G	A	R	D	Y	C	L	I	L	L	A	Y	R	H	G	M	R	I	S	E	L	L	D	L	H	Y	Q	D	L	D	L	N	E	G	R	I	N	I	.	.	.	.	.	.	R	R	L	K	N	G	F	S	T	V	H
Query Conservation																					.	.																																											.	.	.	.	.	.
Alig confidence																					.	.																																											.	.	.	.	.	.
Template Conservation
Template Sequence		K	Q	A	L	A	F	E	R	T	D	F	D	Q	V	R	S	L	M	E	N	S	D	R	C	Q	D	I	R	N	L	A	F	L	G	I	A	Y	N	T	L	L	R	I	A	E	I	A	R	I	R	V	K	D	I	S	R	T	D	G	G	R	M	L	I	H	I	G	R	T	K	T	L	V	S	T	A	G	V	E	K
Template Known Secondary structure																					T																														B	G	G	G					G	G	G											S	S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.																.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	R	F	D	E	R	E	A	V	E	R	W	T	Q	E	R	A	N	W	K	G	A	D	R	T	D	A	I	F	I	S	R	R	G	S	R	L	S	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	Y	R	I	I	R	D	A	G	I	E	A	G	T	V	T	Q	T	H	P	H	M	L
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	S	L	G	V	T	K	L	V	E	R	W	I	S	V	S	G	V	A	D	D	P	N	N	Y	L	F	C	R	V	R	K	N	G	V	A	A	P	S	A	T	S	Q	L	S	T	R	A	L	E	G	I	F	E	A	T	H	R	L	I	Y	G	A	K	D	D	S	G	Q	R	Y	L	A	W	S	G	H	S	A
Template Known Secondary structure																	T	T		G	G	G	S	T	T	S	B	S	S					T	T	S						S	S																						S				S	S		S		S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	A	C	G	Y	E	L	A	E	R	G	A	D	T	R	L	I	Q	D	Y	L	G	H	R	N	I	R	H	T	V	R	Y	T	A	S	N	A	A	R	F	A	G	L	W	E	R	N	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	G	A	A	R	D	M	A	R	A	G	V	S	I	P	E	I	M	Q	A	G	G	W	T	N	V	N	I	V	M	N	Y	I	R	N	L	D	S	E	T	G	A	M	V	R	L	L	E
Template Known Secondary structure												T	T											T		S	S	S	T	T					S	T	T		G	G	G	S								T
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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