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Job DescriptionP0AD12
Confidence98.69%DateThu Jan 5 11:19:39 GMT 2012
Rank166Aligned Residues217
% Identity18%Templated2pd4a1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  KKVAIVGL. GW. . LGMPLAMSLSARGWQVTGSKTTQDGVEAARMS. . . . . GIDSYLLRMEPELVCDSDDLDALMDADALV
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Template Sequence  KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLD
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STTSTTT
SSTTTTT




TT
TS
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   74.....80.........90.........100.........110.........120.........130.........140...
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Query Sequence  . . . . . . . . . . ITLPARRSGPGDEFYLQAVQELVDSALAHRIPRIIFTSSTSVYGDAQGTVKETTPRNPVTNSGRVLEELE
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Template Sequence  FIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALE
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GGGGSS
GGG

TGGG
GGGTS

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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   144..... 150.........160.........170.........180.. .......190.........200. ........210..
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Query Sequence  DWLHNL. . . . . . PGTSVDILRLAGLVGPGRHPGRFFAGKTAPDGE. . HGVNLVHLEDVIGAITLLL. . . QAPKGGHIYNI
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Template Sequence  SAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFV
Template Known Secondary structure  TTT





TTGGGSTTSTTSS


SGGGTT

S
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   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   213.....
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Query Sequence  CAPAHP
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Template Sequence  DAGYHV
Template Known Secondary structure  STTGGG
Template Predicted Secondary structure 




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   247..250..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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