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Job DescriptionP0AD12
Confidence99.93%DateThu Jan 5 11:19:39 GMT 2012
Rank55Aligned Residues264
% Identity16%Templated1orra_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3...... 10.........20.........30.........40... ......50.........60.........70...
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Query Sequence  KVAIVGL. GWLGMPLAMSLSARGWQVTGSKTTQDGVEAARMS. . . . . . GIDSYLLRMEPELVCDSDDLDALMDADALV. .
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Template Sequence  KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG
Template Known Secondary structure  TTTSTT



STTTT




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S


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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   74.....80.........90.........100.........110.........120.. .......130..
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Query Sequence  . . . . ITLPARRSGPGDEFYLQAVQELVDSALAHRIPRIIFTSSTSVYGDAQGT. . . . . . . . . . . . . . . . . VKETTPRNPV
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Template Sequence  QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFH
Template Known Secondary structure 




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GGGGTT
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   133......140.........150 .........160.........170..... ....180.........190
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Query Sequence  TNSGRVLEELEDWLHNLP. . . GTSVDILRLAGLVGPGRHPGRFFAG. . . . . . . . . . . . . . . . . . . KTAPDGEHGVNLVHL
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Template Sequence  SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHA
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TT


BTTB
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   191........200........ .210.........220.........230...... ...240.........250.........260....
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Query Sequence  EDVIGAITLLLQAPKGGH. . . . IYNICAPAHPARNVFYPQMARLLGLEPP. . QFRNSLDSGKGKIIDGSRICNELGFEYQ
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Template Sequence  EDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKITNAIDWSPK
Template Known Secondary structure  TTT
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GGGT






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   243......250.........260.........270.........280.........290.........300.........310.........320..
 
   265.
Predicted Secondary structure 

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Query Sequence  YP
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Template Sequence  VS
Template Known Secondary structure  S
Template Predicted Secondary structure 

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   323.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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