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Job DescriptionP0AD12
Confidence98.77%DateThu Jan 5 11:19:39 GMT 2012
Rank131Aligned Residues216
% Identity15%Templatec3v8bC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:putative dehydrogenase, possibly 3-oxoacyl-[acyl-carrier PDBTitle: crystal structure of a 3-ketoacyl-acp reductase from sinorhizobium2 meliloti 1021
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3...... 10.........20.........30.........40... ......50.........60....
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Query Sequence  KVAIVGL. GWLGMPLAMSLSARGWQVTGSKTTQDGVEAARMS. . . . . . GIDSYLLRMEPELVCDSDDLD. . . . . . . . . . .
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Template Sequence  VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQXRNAVRDLVLKFGHLDIV
Template Known Secondary structure  STTSTT
SSTTS


TT
S


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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   65....70.........80.........90.........100.........110.........120.........130.........140....
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Query Sequence  ALMDADALVITLPARRSGPGDEFYLQAVQELVDSALAHRIPRIIFTSSTSVYGDAQGTVKETTPRNPVTNSGRVLEELED
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Template Sequence  VANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVA
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TTTS
TTT


SBTTTB

STT
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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   145.... 150.........160.........170.........180........ .190.........200..... .
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Query Sequence  WLHNL. . . . . . PGTSVDILRLAGLVGPGRHPGRFFAGKTAPDGEHGVNLV. . . . . . . . . HLEDVIGAITLLLQAPK. . . G
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Template Sequence  IVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERARHVT
Template Known Secondary structure  GGGTS
BSS
TT

TT


S




TT
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GGGTTS
B
TSGGGTT

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   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   207..210........
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Query Sequence  GHIYNICAPAHP
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Template Sequence  GSPVWIDGGQGL
Template Known Secondary structure  S
STT
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   247..250........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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