Return to main results Retrieve Phyre Job Id

Job DescriptionP0AD12
Confidence98.72%DateThu Jan 5 11:19:39 GMT 2012
Rank147Aligned Residues199
% Identity12%Templatec3v2hB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:d-beta-hydroxybutyrate dehydrogenase; PDBTitle: the crystal structure of d-beta-hydroxybutyrate dehydrogenase from2 sinorhizobium meliloti
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2....... 10.........20.........30...... ...40.........50.........60.. ..
Predicted Secondary structure 


.







.....










...........
Query SS confidence 







.


























. . . . .

























. . . . . . . . . . .

Query Sequence  KKVAIVGL. GWLGMPLAMSLSARGWQVTGSKTTQDG. . . . . VEAARMSGIDSYLLRMEPELVCDSDD. . . . . . . . . . . LD
Query Conservation 
 





.



  
   
   
  
    
    .....              
           ...........  
Alig confidence 







.


























.....

























...........

Template Conservation 








 


   
  
   
  


  
                                                
Template Sequence  KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADXTKPSEIADXXAXVADRFGGA
Template Known Secondary structure 
S
SSTT
S


TT
SS



TT
SS
Template Predicted Secondary structure 


























Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   65....70.........80.........90.........100.........110.........120.........130.........140....
Predicted Secondary structure 
















































Query SS confidence 















































































Query Sequence  ALMDADALVITLPARRSGPGDEFYLQAVQELVDSALAHRIPRIIFTSSTSVYGDAQGTVKETTPRNPVTNSGRVLEELED
Query Conservation                                                                        
  

   
 
Alig confidence 















































































Template Conservation                                                       
  

            
  

 

  
Template Sequence  DILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXG
Template Known Secondary structure  S








GGG

TT


GGGTS

TT
Template Predicted Secondary structure 













































Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   145.... 150.........160.........170.........180.........190.........200.... .....210.....
Predicted Secondary structure  ......




































...






Query SS confidence 




. . . . . .






















































. . .










Query Sequence  WLHNL. . . . . . PGTSVDILRLAGLVGPGRHPGRFFAGKTAPDGEHGVNLVHLEDVIGAITLLLQAP. . . KGGHIYNICAP
Query Conservation       ......                                        
 
 
 
        ...     


   
Alig confidence 




......















.................





















...










Template Conservation      

 
    




 
 

 
 
 .................   
   
 


  
  
 
     


  
  


Template Sequence  LTKTVALEVAESGVTVNSICPGYVLGQ. . . . . . . . . . . . . . . . . PTKKFITVEQVASLALYLAGDDAAQITGTHVSXDGG
Template Known Secondary structure  TGGGT
SB


.................TT
S
B
SGGGGG

S
STT
Template Predicted Secondary structure 








.................
















Template SS confidence 















































































   163......170.........180......... 190.........200.........210.........220.....
 
   216.
Predicted Secondary structure 

Query SS confidence 

Query Sequence  AH
Query Conservation    
Alig confidence 

Template Conservation    
Template Sequence  WT
Template Known Secondary structure  ST
Template Predicted Secondary structure 

Template SS confidence 

   255.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions