Job Description P0AD12 Confidence 98.97% Date Thu Jan 5 11:19:39 GMT 2012 Rank 99 Aligned Residues 218 % Identity 12% Template c3ppiA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:3-hydroxyacyl-coa dehydrogenase type-2; PDBTitle: crystal structure of 3-hydroxyacyl-coa dehydrogenase type-2 from2 mycobacterium avium Resolution 2.00 Å

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		2	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure										.																																		.	.	.
Query SS confidence										.																																		.	.	.
Query Sequence		K	K	V	A	I	V	G	L	.	G	W	L	G	M	P	L	A	M	S	L	S	A	R	G	W	Q	V	T	G	S	K	T	T	Q	D	G	V	E	A	A	R	M	.	.	.	S	G	I	D	S	Y	L	L	R	M	E	P	E	L	V	C	D	S	D	D	L	D	A	L	M	D	A	D	A	L	V	I	T	L	P
Query Conservation										.																																		.	.	.
Alig confidence										.																																		.	.	.
Template Conservation
Template Sequence		A	S	A	I	V	S	G	G	A	G	G	L	G	E	A	T	V	R	R	L	H	A	D	G	L	G	V	V	I	A	D	L	A	A	E	K	G	K	A	L	A	D	E	L	G	N	R	A	E	F	V	S	T	N	V	T	S	E	D	S	V	L	A	A	I	E	A	A	N	Q	L	G	R	L	R	Y	A	V	V	A
Template Known Secondary structure								T	T	T	S													T	T								S														T	T								T	T													T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		78	.	80	.																				.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	R	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	G	D	E	F	Y	L	Q	A	V	Q	E	L	V	D	S	A	L	A	H	R	I	P	R	I	I	F	T	S	S	T	S	V	Y	G	D	A	Q	G	T	V	K	E	T	T	P	R	N	P	V	T	N	S	G	R	V
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	G	G	F	G	V	A	Q	R	I	V	Q	R	D	G	S	P	A	D	M	G	G	F	T	K	T	I	D	L	Y	L	N	G	T	Y	N	V	A	R	L	V	A	A	S	I	A	A	A	E	P	R	E	N	G	E	R	G	A	L	V	L	T	A	S	I	A	G	Y	E	G	Q	I	G	Q	T	A	Y	A	A	A
Template Known Secondary structure											S	B		T	T	S		B														T																T	S				T	T	S											G	G	G	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.							150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210
Predicted Secondary structure													.	.	.	.	.	.																																				.																					.
Query SS confidence													.	.	.	.	.	.																																				.																					.
Query Sequence		L	E	E	L	E	D	W	L	H	N	L	.	.	.	.	.	.	P	G	T	S	V	D	I	L	R	L	A	G	L	V	G	P	G	R	H	P	G	R	F	F	A	G	K	T	A	P	D	G	E	H	G	.	V	N	L	V	H	L	E	D	V	I	G	A	I	T	L	L	L	Q	A	P	.	K	G	G	H	I	Y
Query Conservation													.	.	.	.	.	.																																				.																					.
Alig confidence													.	.	.	.	.	.																																				.																					.
Template Conservation
Template Sequence		K	A	G	V	I	G	L	T	I	A	A	A	R	D	L	S	S	A	G	I	R	V	N	T	I	A	P	G	T	M	K	T	P	I	M	E	S	V	G	E	E	A	L	A	K	F	A	A	N	I	P	F	P	K	R	L	G	T	P	D	E	F	A	D	A	A	A	F	L	L	T	N	G	Y	I	N	G	E	V	M
Template Known Secondary structure																	G	G	G	T										S	B							T	T											T			S	S	S	S		B																S	S			S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	C	A	P	A	H	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	D	G	A	Q	R	F	T
Template Known Secondary structure				S	T	T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions