Job Description P0AD12 Confidence 99.77% Date Thu Jan 5 11:19:39 GMT 2012 Rank 79 Aligned Residues 198 % Identity 12% Template c3nzoB_ PDB info PDB header:lyase Chain: B: PDB Molecule:udp-n-acetylglucosamine 4,6-dehydratase; PDBTitle: udp-n-acetylglucosamine 4,6-dehydratase from vibrio fischeri. Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.											.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.																.																				.	.	.	.	.	.	.	.	.	.
Query SS confidence										.																.																				.	.	.	.	.	.	.	.	.	.
Query Sequence		K	K	V	A	I	V	G	L	.	G	W	L	G	M	P	L	A	M	S	L	S	A	R	G	.	W	Q	V	T	G	S	K	T	T	Q	D	G	V	E	A	A	R	M	S	.	.	.	.	.	.	.	.	.	.	G	I	D	S	Y	L	L	R	M	E	P	E	L	V	C	D	S	D	D	L	D	A	L	M	D	A
Query Conservation										.																.																				.	.	.	.	.	.	.	.	.	.
Alig confidence										.																.																				.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	R	F	L	V	L	G	G	A	G	S	I	G	Q	A	V	T	K	E	I	F	K	R	N	P	Q	K	L	H	V	V	D	I	S	E	N	N	X	V	E	L	V	R	D	I	R	S	S	F	G	Y	I	N	G	D	F	Q	T	F	A	L	D	I	G	S	I	E	Y	D	A	F	I	K	A	D	G	Q	Y	D	Y
Template Known Secondary structure								T	T	T	S												T	T			S							S																				S	S									T	T	S														S
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		70	.	.	.	.	.	.	.	.	.								80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure												.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.
Query Sequence		D	A	L	V	I	T	L	P	A	R	.	.	.	.	.	.	.	R	S	G	P	G	D	E	F	Y	L	Q	A	V	Q	E	L	V	D	S	A	L	A	H	R	I	P	R	I	I	F	T	S	S	T	S	V	Y	G	D	A	Q	G	T	V	K	E	T	T	P	R	N	P	V	T	N	S	G	R	V	L	E	E	L
Query Conservation												.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	N	L	S	A	L	K	H	V	R	S	E	K	D	P	F	T	L	X	R	X	I	D	V	N	V	F	N	T	D	K	T	I	Q	Q	S	I	D	A	G	A	K	K	Y	F	C	V	S	T	D	K	A	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	N	X	X	G	A	S	K	R	I	X
Template Known Secondary structure											G	G	G	G	S	S												T													T	T		S								S		S	S		.	.	.	.	.	.	.	.	.	.	.	.	.			S
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.														.	.	170	.	.	.	.	.	.	.	.	.
		143	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		E	D	W	L	H	N	L	.	P	G	T	S	V	D	I	L	R	L	A	G	L	V	G	P	G	R	H	P	G	R	F	F	A	G	K	T	A	P	D	G	E	H	G	V	N	L	V	H	L	E	D	V	I	G	A	I	T	L	L	L	Q	A	P	K	G	G	H	I	Y	N	I	C	A	P	A	H	P	A
Query Conservation									.
Alig confidence									.																				.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.
Template Sequence		E	X	F	L	X	R	K	S	E	E	I	A	I	S	T	A	R	F	A	N	V	A	F	S	D	G	S	.	.	.	.	.	.	.	R	I	Q	K	N	Q	P	I	K	R	Y	F	V	T	P	Q	E	S	G	E	L	C	L	X	S	C	I	F	G	E	N	R	D	I	F	F	P	K	D	X	A	R	F	D
Template Known Secondary structure									T	T	T	S										B	T	T		T	T		.	.	.	.	.	.	.		T	T	T	T								B																		T	T									S	S		S
Template Predicted Secondary structure																													.	.	.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.								.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions