Return to main results Retrieve Phyre Job Id

Job DescriptionP0AD12
Confidence98.44%DateThu Jan 5 11:19:39 GMT 2012
Rank240Aligned Residues197
% Identity11%Templatec3kvoB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:hydroxysteroid dehydrogenase-like protein 2; PDBTitle: crystal structure of the catalytic domain of human hydroxysteroid2 dehydrogenase like 2 (hsdl2)
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2....... 10.........20.........30.........40... ......50.........60....
Predicted Secondary structure 


.








.............









...
Query SS confidence 







.

































. . . . . . . . . . . . .




















. . .
Query Sequence  KKVAIVGL. GWLGMPLAMSLSARGWQVTGSKTTQDGVEAARMS. . . . . . . . . . . . . GIDSYLLRMEPELVCDSDDLD. . .
Query Conservation 
 





.



  
   
   
  
    
           .............       
             ...
Alig confidence 







.

































.............




















...
Template Conservation 
 





  


 


  

  
  
    
           
                   
                
Template Sequence  CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIK
Template Known Secondary structure 
T
SSTTT
S
SS

SSS


T


TT
Template Predicted Secondary structure 































Template SS confidence 















































































   11........20.........30.........40.........50.........60.........70.........80.........90
 
   65....70.........80.........90.........100.........110.........120.........130.......
Predicted Secondary structure  .......
















































Query SS confidence  . . . . . . .








































































Query Sequence  . . . . . . . ALMDADALVITLPARRSGPGDEFYLQAVQELVDSALAHRIPRIIFTSSTSVYGDAQGTVKETTPRNPVTNSGR
Query Conservation  .......                                                                      
  
Alig confidence  .......








































































Template Conservation                                                           

 


              
 
Template Sequence  KFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTI
Template Known Secondary structure  S











TTTS
TTT
SS








TSS
Template Predicted Secondary structure 



























































Template SS confidence 















































































   91........100.........110.........120.........130.........140.........150.........160.........170
 
   138.140......... 150.........160.........170.........180.........190.........200.....
Predicted Secondary structure  .....





































Query SS confidence 











. . . . .























































Query Sequence  VLEELEDWLHNL. . . . . PGTSVDILRLAGLVGPGRHPGRFFAGKTAPDGEHGVNLVHLEDVIGAITLLLQAPK
Query Conservation 

   
      .....                                        
 
 
 
         
Alig confidence 











.....



















.......




























Template Conservation 




  
   

 

   



 
 

 
 
     .......              
  
           
Template Sequence  AKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAAMD. . . . . . . MLGGPGIESQCRKVDIIADAAYSIFQKPK
Template Known Secondary structure  TTTT

SB
B

.......
TTGGGG
B
TS
T
Template Predicted Secondary structure 










.......















Template SS confidence 








































































   171........180.........190.........200....... ..210.........220.........230......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions