Job Description P0AD12 Confidence 100.00% Date Thu Jan 5 11:19:39 GMT 2012 Rank 1 Aligned Residues 259 % Identity 25% Template c3iusB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized conserved protein; PDBTitle: the structure of a functionally unknown conserved protein2 from silicibacter pomeroyi dss Resolution 1.66 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	V	A	I	V	G	L	G	W	L	G	M	P	L	A	M	S	L	S	A	R	G	W	Q	V	T	G	S	K	T	T	Q	D	G	V	E	A	A	R	M	S	G	I	D	S	Y	L	L	R	M	E	P	E	L	V	C	D	S	D	D	L	D	A	L	M	D	A	D	A	L	V	I	T	L	P	A	R	R	S
Query Conservation
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	T	L	L	S	F	G	H	G	Y	T	A	R	V	L	S	R	A	L	A	P	Q	G	W	R	I	I	G	T	S	R	N	P	D	Q	X	E	A	I	R	A	S	G	A	E	P	L	L	W	P	G	E	E	.	.	.	.	.	.	.	.	.	.	.	.	P	S	L	D	G	V	T	H	L	L	I	S	T	A	P
Template Known Secondary structure								T													G	G	G	T								S		G	G	G							T	T	S					T	T	T	S		.	.	.	.	.	.	.	.	.	.	.	.				T	T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.													.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	G	D	E	F	Y	L	Q	A	V	Q	E	L	V	D	S	A	L	A	H	R	I	P	R	I	I	F	T	S	S	T	S	V	Y	G	D	A	Q	G	T	V	K	E	T	T	P	R	N	P	V	T	N	S	G	R	V	L	E	E	L	E	D	W	L	H	N	L	P	G	T	S	V	D	I	L	R	L	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	S	G	G	D	P	V	L	A	A	L	G	D	Q	I	A	A	R	A	A	Q	F	R	W	V	G	Y	L	S	T	T	A	V	Y	G	D	H	D	G	A	W	V	D	E	T	T	P	L	T	P	T	A	A	R	G	R	W	R	V	X	A	E	Q	Q	W	Q	A	V	P	N	L	P	L	H	V	F	R	L	A	G
Template Known Secondary structure		B	T	T	B														T	G	G	G		S								G	G	G	S				T	T					T	T	S						S															T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	G	P	G	R	H	P	G	R	F	F	A	G	K	T	A	P	D	G	E	H	G	V	N	L	V	H	L	E	D	V	I	G	A	I	T	L	L	L	Q	A	P	K	G	G	H	I	Y	N	I	C	A	P	A	H	P	A	R	N	V	F	Y	P	Q	M	A	R	L	L	G	L	E	P	P	Q	F	R	N	S
Query Conservation
Alig confidence									.	.
Template Conservation									.	.
Template Sequence		I	Y	G	P	G	R	G	.	.	P	F	G	G	I	R	R	I	I	K	P	G	Q	V	F	S	R	I	H	V	E	D	I	A	Q	V	L	A	A	S	X	A	R	P	D	P	G	A	V	Y	N	V	C	D	D	E	P	V	P	P	Q	D	V	I	A	Y	A	A	E	L	Q	G	L	P	L	P	P	A	V	D	F
Template Known Secondary structure				B	T	T	B	S	.	.											T	T			B																		S			T	T								S			B													T	T									G
Template Predicted Secondary structure									.	.
Template SS confidence
		151	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		242	.	.											.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	S	.	.	.	.	.	.	.	.	.	.	G	K	G	K	I	I	D	G	S	R	I	C	N	E	L	G	F	E	Y	Q	Y	P	D	P	L	V	M	P	L	E
Query Conservation					.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	K	A	D	L	T	P	X	A	R	S	F	Y	S	E	N	K	R	V	R	N	D	R	I	K	E	E	L	G	V	R	L	K	Y	P	N	Y	R	V	G	L	E	A
Template Known Secondary structure		G	G											T	T													T	T					S			S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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