Job Description P0AD12 Confidence 99.92% Date Thu Jan 5 11:19:39 GMT 2012 Rank 59 Aligned Residues 260 % Identity 15% Template c3a1nB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:ndp-sugar epimerase; PDBTitle: crystal structure of l-threonine dehydrogenase from2 hyperthermophilic archaeon thermoplasma volcanium Resolution 2.07 Å

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		4	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.							.	.
Predicted Secondary structure								.																																																																		.	.	.	.	.	.
Query SS confidence								.																																																																		.	.	.	.	.	.
Query Sequence		V	A	I	V	G	L	.	G	W	L	G	M	P	L	A	M	S	L	S	A	R	G	W	Q	V	T	G	S	K	T	T	Q	D	G	V	E	A	A	R	M	S	G	I	D	S	Y	L	L	R	M	E	P	E	L	V	C	D	S	D	D	L	D	A	L	M	D	A	D	A	L	V	I	.	.	.	.	.	.	T	L
Query Conservation								.																																																																		.	.	.	.	.	.
Alig confidence								.																														.	.	.																																		.	.	.	.	.	.
Template Conservation																																						.	.	.
Template Sequence		I	L	V	T	G	S	S	G	Q	I	G	T	E	L	V	P	Y	L	A	E	K	Y	G	K	K	N	V	I	A	S	D	I	V	Q	R	D	.	.	.	T	G	G	I	K	F	I	T	L	D	V	S	N	R	D	E	I	D	R	A	V	E	K	Y	S	I	D	A	I	F	H	L	A	G	I	L	S	A	K	G	E
Template Known Secondary structure						T	T	T	S																G	G	G						S	S				.	.	.		T	T								T	T												T	T
Template Predicted Secondary structure																																						.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.	.	.
Predicted Secondary structure																																																																											.	.	.
Query SS confidence																																																																											.	.	.
Query Sequence		P	A	R	R	S	G	P	G	D	E	F	Y	L	Q	A	V	Q	E	L	V	D	S	A	L	A	H	R	I	P	R	I	I	F	T	S	S	T	S	V	Y	G	D	A	Q	G	T	V	K	E	T	T	P	R	N	P	V	T	N	S	G	R	V	L	E	E	L	E	D	W	L	H	N	L	.	.	.	P	G	T	S
Query Conservation																																																																											.	.	.
Alig confidence																																																																											.	.	.
Template Conservation
Template Sequence		K	D	P	A	L	A	Y	K	V	N	M	N	G	T	Y	N	I	L	E	A	A	K	Q	H	R	V	E	K	V	V	I	P	S	T	I	G	V	F	G	P	E	T	P	K	N	K	V	P	S	I	T	I	T	R	P	R	T	M	Y	G	V	T	K	I	A	A	E	L	L	G	Q	Y	Y	Y	E	K	F	G	L	D
Template Known Secondary structure																									T	T										G	G	G			T	T	S		S	S	S	B		S	S	S						S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.																.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.				.	210	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Query Sequence		V	D	I	L	R	L	A	G	L	V	G	P	G	R	H	P	G	R	F	F	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	A	P	D	G	E	H	G	V	N	L	V	H	L	E	D	V	I	G	A	I	T	L	L	L	Q	A	P	K	G	G	H	.	.	.	I	Y	N	I	C	A	P
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Conservation
Template Sequence		V	R	S	L	R	Y	P	G	I	I	S	Y	K	A	E	P	T	A	G	T	T	D	Y	A	V	E	I	F	Y	Y	A	V	K	R	E	K	Y	K	C	Y	L	A	P	N	R	A	L	P	M	M	Y	M	P	D	A	L	K	A	L	V	D	L	Y	E	A	D	R	D	K	L	V	L	R	N	G	Y	N	V	T	A
Template Known Secondary structure													S	S	S						T	T	T											T	T						S	S		T	T																					S		T	T	T		S	S								S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.					.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.
Query SS confidence																														.	.	.	.
Query Sequence		A	H	P	A	R	N	V	F	Y	P	Q	M	A	R	L	L	G	L	E	P	P	Q	F	R	N	S	L	D	.	.	.	.	S	G	K	G	K	I	I	D	G	S	R	I	C	N	E	L	G	F	E	Y	Q	Y	P
Query Conservation																														.	.	.	.
Alig confidence																														.	.	.	.
Template Conservation
Template Sequence		Y	T	F	T	P	S	E	L	Y	S	K	I	K	E	R	I	P	E	F	E	I	E	Y	K	E	D	F	R	D	K	I	A	A	T	W	P	E	S	L	D	S	S	E	A	S	N	E	W	G	F	S	I	E	Y	D
Template Known Secondary structure															T	T		T	T																T	S		S		B														S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions