Job Description P0AD12 Confidence 99.96% Date Thu Jan 5 11:19:39 GMT 2012 Rank 20 Aligned Residues 259 % Identity 15% Template c2x4gA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:nucleoside-diphosphate-sugar epimerase; PDBTitle: crystal structure of pa4631, a nucleoside-diphosphate-sugar2 epimerase from pseudomonas aeruginosa Resolution 2.65 Å

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		1	.	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		M	K	K	V	A	I	V	G	L	.	G	W	L	G	M	P	L	A	M	S	L	S	A	R	G	W	Q	V	T	G	S	K	T	T	Q	D	G	V	E	A	A	R	M	S	G	I	D	S	Y	L	L	R	M	E	P	E	L	V	C	D	S	D	D	L	D	A	L	M	D	A	D	A	L	V	I	T	L	P	A	R
Query Conservation											.
Alig confidence				.							.
Template Conservation				.
Template Sequence		V	K	.	Y	A	V	L	G	A	T	G	L	L	G	H	H	A	A	R	A	I	R	A	A	G	H	D	L	V	L	I	H	R	P	S	S	Q	I	Q	R	L	A	Y	L	E	P	E	C	R	V	A	E	M	L	D	H	A	G	L	E	R	A	L	R	G	L	D	G	V	I	F	S	E	E	V	A	S	A	L	G
Template Known Secondary structure				.					S	T	T	S													T	T									T	T	S		G	G	G	G	G	G	G									T	T									T	T	T		S
Template Predicted Secondary structure				.
Template SS confidence
		13	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		R	S	G	P	G	D	E	F	Y	L	Q	A	V	Q	E	L	V	D	S	A	L	A	H	R	I	P	R	I	I	F	T	S	S	T	S	V	Y	G	D	A	Q	G	T	V	K	E	T	T	P	R	N	P	V	T	N	S	G	R	V	L	E	E	L	E	D	W	L	H	N	L	.	.	P	G	T	S	V	D	I	L
Query Conservation																																																																								.	.
Alig confidence																	.	.	.	.	.																																																			.	.
Template Conservation																	.	.	.	.	.
Template Sequence		Q	T	N	P	F	Y	A	A	C	L	Q	A	R	V	P	.	.	.	.	.	R	I	L	Y	V	G	S	A	Y	A	M	P	R	H	P	Q	G	L	P	G	H	E	G	L	F	Y	D	S	L	P	S	G	K	S	S	Y	V	L	C	K	W	A	L	D	E	Q	A	R	E	Q	A	R	N	G	L	P	V	V	I	G
Template Known Secondary structure														T		S	.	.	.	.	.								G	G	G	S				T	T	S	S		B		T	T				S	S			T	T	S																				T	T
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.						.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.								.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																				.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.
Query Sequence		R	L	A	G	L	V	G	P	G	R	H	P	G	R	F	F	A	G	.	.	.	.	.	.	.	K	T	A	P	D	G	E	H	G	V	N	L	V	H	L	E	D	V	I	G	A	I	T	L	L	L	Q	A	P	K	G	G	H	I	Y	N	I	C	A	P	A	H	P	A	R	N	V	F	Y	P	Q	M	A	R	L
Query Conservation																				.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.																																							.
Template Conservation																																																																	.
Template Sequence		I	P	G	M	V	L	G	E	L	D	I	G	P	T	T	G	R	V	I	T	A	I	G	N	G	E	M	T	H	Y	V	A	G	Q	R	N	V	I	D	A	A	E	A	G	R	G	L	L	M	A	L	E	R	G	R	I	G	E	R	Y	L	L	T	.	G	H	N	L	E	M	A	D	L	T	R	R	I	A	E	L
Template Known Secondary structure									S			S	S		S	T	T								T	T																													S		T	T							.
Template Predicted Secondary structure																																																																	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.													.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	L	E	P	P	Q	F	R	N	S	.	.	.	.	.	.	.	.	.	.	.	.	L	D	S	G	K	G	K	I	I	D	G	S	R	I	C	N	E	L	G	F	E	Y	Q	Y	P
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	Q	P	A	P	Q	P	M	S	M	A	M	A	R	A	L	A	T	L	G	R	L	E	V	M	A	G	G	Q	F	L	D	G	R	K	A	R	E	E	L	G	F	F	S	T	T	A
Template Known Secondary structure			T																								T	T					B															S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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