Phyre 2 alignment of P0AD12 with c2v6gA

Job Description P0AD12
Confidence 99.93% Date Thu Jan 5 11:19:39 GMT 2012

Rank 54 Aligned Residues 263

% Identity 15% Template c2v6gA_

PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:progesterone 5-beta-reductase; PDBTitle: structure of progesterone 5beta-reductase from digitalis2 lanata in complex with nadp

Resolution 2.3 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	2	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.						.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure									.																	.	.	.	.	.
Query SS confidence									.																	.	.	.	.	.
Query Sequence	K	K	V	A	I	V	G	L	.	G	W	L	G	M	P	L	A	M	S	L	S	A	R	G	W	.	.	.	.	.	Q	V	T	G	S	K	T	T	Q	D	G	V	E	A	A	R	M	S	G	I	D	S	Y	L	L	R	M	E	P	E	L	V	C	D	S	D	D	L	D	A	L	M	D	A	D	A	L	V	I	T
Query Conservation									.																	.	.	.	.	.
Alig confidence									.																	.	.	.	.	.													.
Template Conservation																																											.
Template Sequence	S	V	A	L	I	V	G	V	T	G	I	I	G	N	S	L	A	E	I	L	P	L	A	D	T	P	G	G	P	W	K	V	Y	G	V	A	R	R	T	R	P	A	.	W	H	E	D	N	P	I	N	Y	V	Q	C	D	I	S	D	P	D	D	S	Q	A	K	L	S	P	L	T	D	V	T	H	V	F	Y	V	T
Template Known Secondary structure							T	T	T	S										T	T	S	T	T		T	T		S								S	S				S	.				S	S									T	T	S									T	T		T	T
Template Predicted Secondary structure																																											.
Template SS confidence
	27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.

	76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130								.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																												.	.	.																													.	.	.	.	.	.	.
Query SS confidence																												.	.	.																													.	.	.	.	.	.	.
Query Sequence	L	P	A	R	R	S	G	P	G	D	E	F	Y	L	Q	A	V	Q	E	L	V	D	S	A	L	A	H	.	.	.	R	I	P	R	I	I	F	T	S	S	T	S	V	Y	G	D	A	Q	G	T	V	K	E	T	T	P	R	N	.	.	.	.	.	.	.	P	V	T	N	S	G	R	V	L	E	E	L	E	D	W
Query Conservation																												.	.	.																													.	.	.	.	.	.	.
Alig confidence																												.	.	.																													.	.	.	.	.	.	.
Template Conservation
Template Sequence	W	A	N	R	S	T	E	Q	E	N	C	E	A	N	S	K	M	F	R	N	V	L	D	A	V	I	P	N	C	P	N	L	K	H	I	S	L	Q	T	G	R	K	H	Y	M	G	P	F	E	S	Y	G	K	I	E	S	H	D	P	P	Y	T	E	D	L	P	R	L	K	Y	M	N	F	Y	Y	D	L	E	D	I
Template Known Secondary structure					S	S																				T	T	T		T	T										T							G	G	G	T	T	T	S					S	S	B		T	T	S				S	S
Template Predicted Secondary structure
Template SS confidence
	106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

	146	.	.	.	150					.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.																				.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure						.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	L	H	N	L	P	.	.	.	.	G	T	S	V	D	I	L	R	L	A	G	L	V	G	P	G	R	H	P	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	F	A	G	K	T	A	P	D	G	E	H	G	V	N	L	V	H	L	E	D	V	I	G	A	I	T	L	L	L	Q
Query Conservation						.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	M	L	E	E	V	E	K	K	E	G	L	T	W	S	V	H	R	P	G	N	I	F	G	F	S	P	Y	S	M	M	N	L	V	G	T	L	C	V	Y	A	A	I	C	K	H	E	G	K	V	L	R	F	T	G	C	K	A	A	W	D	G	Y	S	D	C	S	D	A	D	L	I	A	E	H	H	I	W	A	A	V
Template Known Secondary structure						T	T	S	T	T									S	S						T	T		S	S																	T			B				S							S		B
Template Predicted Secondary structure
Template SS confidence
	186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

	203	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure					.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	A	P	K	G	.	G	H	I	Y	N	I	C	A	P	A	H	P	A	R	N	V	F	Y	P	Q	M	A	R	L	L	G	L	E	P	P	Q	F	R	N	S	L	D	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation					.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	D	P	Y	A	K	N	E	A	F	N	V	S	N	G	D	V	F	K	W	K	H	F	W	K	V	L	A	E	Q	F	G	V	E	C	G	E	Y	E	E	G	V	D	L	K	L	Q	D	L	M	K	G	K	E	P	V	W	E	E	I	V	R	E	N	G	L	T	P	T	K	L	K	D	V	G	I	W	W	F	G	D
Template Known Secondary structure		G	G	G	T	T								S			B														T			B					T	T									T	T	T												T	T
Template Predicted Secondary structure
Template SS confidence
	266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

						246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure	.	.	.	.	.
Query SS confidence	.	.	.	.	.
Query Sequence	.	.	.	.	.	K	G	K	I	I	D	G	S	R	I	C	N	E	L	G	F	E	Y	Q	Y	P
Query Conservation	.	.	.	.	.
Alig confidence	.	.	.	.	.													.
Template Conservation																		.
Template Sequence	V	I	L	G	N	E	C	F	L	D	S	M	N	K	S	K	E	.	H	G	F	L	G	F	R	N
Template Known Secondary structure				T	S					B								.	T	T
Template Predicted Secondary structure																		.
Template SS confidence
	346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370

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Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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