Job Description P0AD12 Confidence 99.97% Date Thu Jan 5 11:19:39 GMT 2012 Rank 6 Aligned Residues 265 % Identity 15% Template c2pzlB_ PDB info PDB header:sugar binding protein Chain: B: PDB Molecule:putative nucleotide sugar epimerase/ dehydratase; PDBTitle: crystal structure of the bordetella bronchiseptica enzyme2 wbmg in complex with nad and udp Resolution 2.39 Å

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		1	.	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure											.																																		.	.
Query SS confidence											.																																		.	.
Query Sequence		M	K	K	V	A	I	V	G	L	.	G	W	L	G	M	P	L	A	M	S	L	S	A	R	G	W	Q	V	T	G	S	K	T	T	Q	D	G	V	E	A	A	R	M	.	.	S	G	I	D	S	Y	L	L	R	M	E	P	E	L	V	C	D	S	D	D	L	D	A	L	M	D	A	D	A	L	V	I	T	L	P
Query Conservation											.																																		.	.
Alig confidence				.							.																																		.	.
Template Conservation				.
Template Sequence		M	R	.	I	L	I	T	G	G	A	G	C	L	G	S	N	L	I	E	H	W	L	P	Q	G	H	E	I	L	V	I	D	N	F	A	T	G	K	R	E	V	L	P	P	V	A	G	L	S	V	I	E	G	S	V	T	D	A	G	L	L	E	R	A	F	D	S	F	K	P	T	H	V	V	H	S	A	A	A	Y
Template Known Secondary structure				.					T	T	T	S											G	G	G	T										S	S	S		G	G	G	S		S		T	T								T	T															S
Template Predicted Secondary structure				.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		78	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		A	R	.	.	R	S	G	P	G	D	E	F	Y	L	Q	A	V	Q	E	L	V	D	S	A	L	A	H	R	I	P	R	I	I	F	T	S	S	T	S	V	Y	G	D	A	Q	G	T	V	K	E	T	T	P	R	N	P	V	T	N	S	G	R	V	L	E	E	L	E	D	W	L	H	N	L	P	G	T	S	V	D
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		K	D	P	D	D	W	A	E	D	A	A	T	N	V	Q	G	S	I	N	V	A	K	A	A	S	K	A	G	V	K	R	L	L	N	F	Q	T	A	L	C	Y	G	R	P	A	T	V	P	I	P	I	D	S	P	T	A	P	F	T	S	Y	G	I	S	K	T	A	G	E	A	F	L	M	M	S	D	V	P	V	V
Template Known Secondary structure		S		T	T										T													T	T		S								G	G	G	G		S		S	S	S	S	B		T	T	S						S														T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.								.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.
Query Sequence		I	L	R	L	A	G	L	V	G	P	G	R	H	P	G	R	F	.	.	.	.	.	.	.	F	A	G	K	T	A	P	D	G	E	H	G	V	N	L	V	H	L	E	D	V	I	G	A	I	T	L	L	L	Q	A	P	K	G	G	H	I	Y	N	I	C	A	P	A	H	P	A	R	N	V	F	Y	P	Q	M	A
Query Conservation																			.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	R	L	A	N	V	T	G	P	R	L	A	I	G	P	I	P	T	F	Y	K	R	L	K	A	G	Q	K	C	F	C	S	D	T	V	R	D	F	L	D	M	S	D	F	L	A	I	A	D	L	S	L	Q	E	G	R	P	T	G	V	F	N	V	S	T	G	E	G	H	S	I	K	E	V	F	D	V	V	L
Template Known Secondary structure											T	T			S	S											T	T							S																			T	S	T	T									S		S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	L	G	L	E	P	P	Q	F	R	N	S	L	D	S	G	K	G	K	I	I	D	G	S	R	I	C	N	E	L	G	F	E	Y	Q	Y	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Y	V	G	A	P	V	P	V	V	A	P	G	A	D	D	V	P	S	V	V	L	D	P	S	K	T	E	T	E	F	G	W	K	A	K	V	D
Template Known Secondary structure					T										T	T	S		S	B			B															S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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