Job Description P0AD12 Confidence 99.86% Date Thu Jan 5 11:19:39 GMT 2012 Rank 64 Aligned Residues 238 % Identity 13% Template c2gn9B_ PDB info PDB header:lyase Chain: B: PDB Molecule:udp-glcnac c6 dehydratase; PDBTitle: crystal structure of udp-glcnac inverting 4,6-dehydratase in complex2 with nadp and udp-glc Resolution 2.80 Å

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		2	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure										.															.	.
Query SS confidence										.															.	.
Query Sequence		K	K	V	A	I	V	G	L	.	G	W	L	G	M	P	L	A	M	S	L	S	A	R	.	.	G	W	Q	V	T	G	S	K	T	T	Q	D	G	V	E	A	A	R	M	S	G	I	D	S	Y	L	L	R	M	E	P	E	L	V	C	D	S	D	D	L	D	A	L	M	D	A	D	A	L	V	I	T	L	P	A
Query Conservation										.															.	.
Alig confidence										.															.	.
Template Conservation
Template Sequence		Q	T	I	L	I	T	G	G	T	G	S	F	G	K	C	F	V	R	K	V	L	D	T	T	N	A	K	K	I	I	V	Y	S	R	D	E	L	K	Q	S	E	M	A	M	E	F	N	D	P	R	M	R	F	F	I	G	D	V	R	D	L	E	R	L	N	Y	A	L	E	G	V	D	I	C	I	H	A	A	A	L
Template Known Secondary structure								T	T	T	S														S	B		S							S												S			T	T								T	T									T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		79								80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.																																																																							.	.
Query SS confidence			.	.	.	.	.	.	.																																																																							.	.
Query Sequence		R	.	.	.	.	.	.	.	R	S	G	P	G	D	E	F	Y	L	Q	A	V	Q	E	L	V	D	S	A	L	A	H	R	I	P	R	I	I	F	T	S	S	T	S	V	Y	G	D	A	Q	G	T	V	K	E	T	T	P	R	N	P	V	T	N	S	G	R	V	L	E	E	L	E	D	W	L	H	N	L	.	.
Query Conservation			.	.	.	.	.	.	.																																																																							.	.
Alig confidence			.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	H	V	P	I	A	E	Y	N	P	L	E	C	I	K	T	N	I	M	G	A	S	N	V	I	N	A	C	L	K	N	A	I	S	Q	V	I	A	L	S	T	D	K	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	I	N	L	Y	G	A	T	K	L	C	S	D	K	L	F	V	S	A	N	N
Template Known Secondary structure										S																						T	T		S								G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S			S																G	G	G
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.														.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
						150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.									.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																			.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																			.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	P	G	T	S	V	D	I	L	R	L	A	G	L	V	G	P	G	R	.	.	.	.	.	.	.	.	H	P	G	R	F	F	A	G	K	T	A	P	D	G	E	H	G	V	N	L	V	H	L	E	D	V	I	G	A	I	T	L	L	L	Q	A	P	K	G	G	H	I	Y	N	I	C	A	P	A	H
Query Conservation		.	.	.	.																			.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																			.	.	.	.	.	.	.	.																																														.
Template Conservation																																																																													.
Template Sequence		F	K	G	S	S	Q	T	Q	F	S	V	V	R	Y	G	N	V	V	G	S	R	G	S	V	V	P	F	F	K	K	L	V	Q	N	K	A	S	E	I	P	I	T	D	I	R	M	T	R	F	W	I	T	L	D	E	G	V	S	F	V	L	K	S	L	K	R	M	H	G	G	E	I	F	V	P	.	K	I	P	S
Template Known Secondary structure				S	S	S													S	S		T	T		S	T	T								T			S					S		S	S																								S	S						.
Template Predicted Secondary structure																																																																													.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	R	N	V	F	Y	P	Q	M	A	R	L	L	G	L	E	P	P	Q	F	R	N	S	L	D	S	G	K	G	K	I	I	D	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	K	M	T	D	L	A	K	A	L	A	P	N	T	P	T	K	I	I	G	I	R	P	G	E	K	L	H	E	V	M	I	P	K	D	E
Template Known Secondary structure				S									S	S	S									T	T			S	S		B	S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions