Job Description P0AD12 Confidence 100.00% Date Thu Jan 5 11:19:39 GMT 2012 Rank 3 Aligned Residues 263 % Identity 16% Template c1z7eC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:protein arna; PDBTitle: crystal structure of full length arna Resolution 3.00 Å

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		1	.	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure											.																.									.
Query SS confidence											.																.									.
Query Sequence		M	K	K	V	A	I	V	G	L	.	G	W	L	G	M	P	L	A	M	S	L	S	A	R	G	.	W	Q	V	T	G	S	K	T	.	T	Q	D	G	V	E	A	A	R	M	S	G	I	D	S	Y	L	L	R	M	E	P	E	L	V	C	D	S	D	D	L	D	A	L	M	D	A	D	A	L	V	I	T	L	P
Query Conservation											.																.									.
Alig confidence											.																.									.																																	.	.	.
Template Conservation																																																																					.	.	.
Template Sequence		R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	.	.	.	K	C	D	V	V	L	P	L	V	A
Template Known Secondary structure									T	T	T	S													S	S	S								S			T	T	T	G	G	G	T	T		T	T								T	T	T											.	.	.			S
Template Predicted Secondary structure																																																																					.	.	.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.				.	.	.	.	.	.	.	.	390	.
									78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130								.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	A	R	R	S	G	P	G	D	E	F	Y	L	Q	A	V	Q	E	L	V	D	S	A	L	A	H	R	I	P	R	I	I	F	T	S	S	T	S	V	Y	G	D	A	Q	G	T	V	K	E	T	T	P	R	N	.	.	.	.	.	.	.	P	V	T	N	S	G	R	V	L	E	E	L	E
Query Conservation		.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D
Template Known Secondary structure					T						S									T													T	T									G	G	G	G	B	T			S	S	S	B		T	T	T				B				T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
		144	.	.	.	.	.	150				.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.																				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure									.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	W	L	H	N	L	P	.	.	.	G	T	S	V	D	I	L	R	L	A	G	L	V	G	P	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	P	G	R	F	F	A	G	K	T	A	P	D	G	E	H	G	V	N	L	V	H	L	E	D	V	I	G	A	I	T	L	L	L
Query Conservation									.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	V	I	W	A	Y	G	E	K	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K	Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I
Template Known Secondary structure																						S			S	T	T	S	S						T	T	T		S													T							G	G	G
Template Predicted Secondary structure
Template SS confidence
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
		202	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.																		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure						.	.	.													.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.													.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	P	K	.	.	.	G	G	H	I	Y	N	I	C	A	P	A	H	.	P	A	R	N	V	F	Y	P	Q	M	A	R	L	L	G	L	E	P	P	Q	F	R	N	S	L	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	G	K	I	I	D	G	S	R	I	C	N	E	L	G
Query Conservation						.	.	.													.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.													.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P	E	N	E	A	S	I	E	E	L	G	E	M	L	L	A	S	F	E	K	H	P	L	R	H	H	F	P	P	F	A	G	F	R	V	V	E	S	S	S	Y	Y	G	K	G	Y	Q	D	V	E	H	R	K	P	S	I	R	N	A	H	R	C	L	D
Template Known Secondary structure			T	G	G	G	T	T	T	T								G	G	G																			T	T	G	G	G	S											T						T	T					S				B
Template Predicted Secondary structure
Template SS confidence
		552	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.
		261	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	Y	Q	Y	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	E	P	K	I	D
Template Known Secondary structure						S
Template Predicted Secondary structure
Template SS confidence
		632	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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