 |
Job Description | P0ACT6 | Confidence | 39.90% | Date | Thu Jan 5 11:19:01 GMT 2012 |
Rank | 486 | Aligned Residues | 39 |
% Identity | 8% | Template | d1ocpa_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Homeodomain
|
Resolution | UNK |
|
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | N | A | A | R | E | I | F | S | E | N | G | F | H | . |
S | A | S | M | K | A | I | C | K | S | C | A | I | S | P | G | T | L | Y | H | H | F | I | S | K |
Query Conservation |   |
|   |
|
|   |   |
|   |   |   |   |
|   |   | . |   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |   |
|   |
|   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |
|
|   |   |
|
|   |
|
|
Template Sequence |   |
R | W | S | L | E | T | M | F | L | K | C | P | K | P | S | L | Q | Q | I | T | H | I | A | N | Q | L | G | L | E | K | D | V | V | R | V | W | F | C | N | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | S | S |
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|