Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACT6
Confidence99.81%DateThu Jan 5 11:19:01 GMT 2012
Rank99Aligned Residues173
% Identity14%Templatec3nxcA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:hth-type protein slma; PDBTitle: molecular mechanism by which the escherichia coli nucleoid occlusion2 factor, slma, keeps cytokinesis in check
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
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Query Sequence  PTRTRILNAAREIFSENGFHSASMKAICKSCAISPGTLYHHFISKEALIQAIILQDQERALARFREPIEGIHFVDYMVES
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Template Sequence  NRREEILQSLALML. . . . . ESITTAKLAASVGVSEAALYRHFPSKTRMFDSLIEFIEDSLITRINLILKDEKDTTARLRL
Template Known Secondary structure  TT.....


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   24.....30....... ..40.........50.........60.........70.........80.........90........
 
   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  IVSLTHEAFGQRALVVEIMAEGMRNPQVAAMLKNKHMTITEFVAQRMRDAQQKGEISPDINTAMTSRLLLDLTYGVLADI
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Template Sequence  IVLLLLGFGERNPGLTRIL. . . TGHARLQGRINQLFERIEAQLRQVLREKRMREGGYA. TDETLLASQILAFCEGMLSRF
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TTTTT



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   105....110.........120... ......130.........140.........150......... 160.........170.........180
 
   171... .....180.........190..
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Query Sequence  EAED. . LAREASFAQGLRAMIGGI
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Template Sequence  VRSEFKYRPTDDFDARWPLIAAQL
Template Known Secondary structure  TTTT
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TTTTTT
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   188.190.........200.........210.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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