Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACT6
Confidence99.91%DateThu Jan 5 11:19:01 GMT 2012
Rank18Aligned Residues185
% Identity17%Templatec3himA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:probable transcriptional regulator; PDBTitle: the crystal structure of a bacterial regulatory protein in the tetr2 family from rhodococcus rha1 to 2.2a
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
Predicted Secondary structure 

















Query SS confidence 















































































Query Sequence  PTRTRILNAAREIFSENGFHSASMKAICKSCAISPGTLYHHFISKEALIQAIILQDQERALARFREPIEGIHFVDYMVES
Query Conservation   

  

 

  
    
    

  

  



  
 
  
  
  
                                
Alig confidence 















































































Template Conservation   

 


 

  
    
    

  

  



  
 
  
  
  
  
                          
  
Template Sequence  KAAARIRAAAIEVFAAKGYGATTTREIAASLDMSPGAVYPHYKTKESLLYAISLEGHHSVLAAITAADFPDIAAPDRLMS
Template Known Secondary structure 
STT

TT

TTSSTTT
SST

TTS
Template Predicted Secondary structure 

















Template SS confidence 















































































   16...20.........30.........40.........50.........60.........70.........80.........90.....
 
   91........100.........110 .........120.........130.........140.........150.........160........
Predicted Secondary structure 


..











Query SS confidence 



















. .

























































Query Sequence  IVSLTHEAFGQRALVVEIMA. . EGMRNPQVAAMLKNKHMTITEFVAQRMRDAQQKGEISPDINTAMTSRLLLDLTYGVLA
Query Conservation                      ..                          
                               
Alig confidence 



















..





































.


















Template Conservation                                                  
      
    .         
         
Template Sequence  TVTAYVTWHADNRASARVGQYELRSLSPEHFAIIADIRRSTTKVFTRIIEAGATAGDFHP. FDIEAAALAITSLGIDVSR
Template Known Secondary structure  T
GGGS
TTS


.S
Template Predicted Secondary structure 








.

Template SS confidence 















































































   96...100.........110.........120.........130.........140.........150..... ....160.........170....
 
   169170.........180.........190......
Predicted Secondary structure 








Query SS confidence 



























Query Sequence  DIEAEDLAREASFAQGLRAMIGGILTAS
Query Conservation                      
 





Alig confidence 



























Template Conservation                        
 

  
Template Sequence  WFPSHTYSDPRIIAARYVELALRMVGCA
Template Known Secondary structure 
S
SS


TT

Template Predicted Secondary structure 








Template SS confidence 



























   175....180.........190.........200..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions