Job Description P0ACT6 Confidence 99.85% Date Thu Jan 5 11:19:01 GMT 2012 Rank 85 Aligned Residues 168 % Identity 14% Template c3colB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative transcription regulator; PDBTitle: crystal structure of putative transcription regulator from2 lactobacillus plantarum Resolution 2.10 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		T	R	T	R	I	L	N	A	A	R	E	I	F	S	E	N	G	F	H	S	A	S	M	K	A	I	C	K	S	C	A	I	S	P	G	T	L	Y	H	H	F	I	S	K	E	A	L	I	Q	A	I	I	L	Q	D	Q	E	R	A	.	.	L	A	R	F	R	E	P	I	E	G	I	H	F	V	D	Y	M	V	E
Query Conservation																																																													.	.
Alig confidence																																																													.	.
Template Conservation
Template Sequence		K	Q	V	K	I	Q	D	A	V	A	A	I	I	L	A	E	G	P	A	G	V	S	T	T	K	V	A	K	R	V	G	I	A	Q	S	N	V	Y	L	Y	F	K	N	K	Q	A	L	I	D	S	V	Y	A	R	E	T	N	R	I	L	S	T	T	D	L	D	R	L	S	D	S	T	I	D	V	T	T	R	I	R
Template Known Secondary structure																			G	G	G											T	S							T	T			S																	S									T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	V	S	L	T	H	E	A	F	G	Q	R	A	L	V	V	E	I	M	A	E	G	M	R	N	P	Q	V	A	A	M	L	K	N	K	H	M	T	I	T	E	F	V	A	Q	R	M	R	D	A	Q	Q	K	G	E	I	S	P	D	I	N	T	A	M	T	S	R	L	L	L	D	L	T	Y	G	V	L	A	D
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		L	Y	V	Q	Q	V	Y	D	Y	S	L	A	N	P	D	S	L	T	I	I	Q	Q	I	K	A	L	N	P	N	.	.	.	.	.	.	.	.	.	.	.	.	N	I	V	A	N	L	L	T	A	A	I	D	A	K	V	I	K	.	Q	L	P	V	S	L	H	X	G	V	V	F	S	T	I	H	T	H	T	T	N
Template Known Secondary structure														S	T	T															.	.	.	.	.	.	.	.	.	.	.	.													T	T	S	B		.	S	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.													.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		I	E	A	E	D	.	L	A	R	E	A	S	F	A	Q	G	L	R	A	M	I	G	G	I
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		I	S	K	G	R	Y	A	Q	D	Q	Y	T	F	G	D	I	F	Q	X	I	W	D	A	X
Template Known Secondary structure				T	T	S	S		T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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