Job Description P0ACT6 Confidence 99.91% Date Thu Jan 5 11:19:01 GMT 2012 Rank 23 Aligned Residues 185 % Identity 19% Template c2zb9A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of tetr family transcription regulator2 sco0332 Resolution 2.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	E	A	Q	P	T	R	T	R	I	L	N	A	A	R	E	I	F	S	E	N	G	F	H	S	A	S	M	K	A	I	C	K	S	C	A	I	S	P	G	T	L	Y	H	H	F	I	S	K	E	A	L	I	Q	A	I	I	L	Q	D	Q	E	R	A	L	A	R	F	R	E	P	I	E	G	I	H	F	V	D
Query Conservation
Alig confidence																																																																									.
Template Conservation																																																																									.
Template Sequence		R	R	P	A	E	E	V	R	A	E	V	L	H	A	V	G	E	L	L	L	T	E	G	T	A	Q	L	T	F	E	R	V	A	R	V	S	G	V	S	K	T	T	L	Y	K	W	W	P	S	K	G	A	L	A	L	D	G	Y	F	H	A	V	E	D	T	L	A	F	P	D	T	.	G	D	V	R	A	D	L	L
Template Known Secondary structure			S																						G	G	G																						S	S																						S	.	S
Template Predicted Secondary structure																																																																									.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	M	V	E	S	I	V	S	L	T	H	E	A	F	G	Q	R	A	L	V	V	E	I	M	A	E	G	M	R	N	P	Q	V	A	A	M	L	K	N	K	H	M	T	I	T	E	F	V	A	Q	R	M	R	D	A	Q	Q	K	G	E	I	S	P	D	I	N	T	A	M	T	S	R	L	L	L	D	L	T	Y	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	L	R	A	F	T	H	V	M	T	R	T	P	G	G	R	I	L	T	E	L	I	G	A	A	Q	T	D	A	D	L	A	T	A	Y	R	Q	L	Y	S	A	Q	R	R	A	L	A	A	E	R	L	R	H	A	R	E	L	G	Q	I	R	P	D	V	D	V	Q	V	L	V	D	Q	L	W	G	A	V	Y	H
Template Known Secondary structure														S														T	T												T																		T	T	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	A	D	I	E	A	E	D	L	A	R	E	A	S	F	A	Q	G	L	R	A	M	I	G	G	I	L
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	R	L	L	I	P	D	E	P	V	D	D	A	F	V	T	A	L	V	T	N	L	L	D	G	V	C
Template Known Secondary structure		.	.				S		S	S																		S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions