Job Description P0ACT6 Confidence 99.82% Date Thu Jan 5 11:19:01 GMT 2012 Rank 97 Aligned Residues 168 % Identity 15% Template c2yvhA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of the operator-binding form of the multi-drug2 binding transcriptional repressor cgmr Resolution 2.50 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	T	R	I	L	N	A	A	R	E	I	F	S	E	N	G	F	H	S	A	S	M	K	A	I	C	K	S	C	A	I	S	P	G	T	L	Y	H	H	F	I	S	K	E	A	L	I	Q	A	I	I	L	Q	D	Q	E	R	A	L	A	R	F	R	E	P	I	E	G	I	H	F	V	D	Y	M	V	E	S	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	E	X	I	L	R	T	A	I	D	Y	I	G	E	Y	S	L	E	T	L	S	Y	D	S	L	A	E	A	T	G	L	S	K	S	G	L	I	Y	H	F	P	S	R	H	A	L	L	L	G	X	H	E	L	L	A	D	D	W	D	K	E	L	R	D	I	T	R	D	P	E	D	P	L	E	R	L	R	A	V
Template Known Secondary structure																	S		S	T	T											S	S									S	S	S																			T	T	T	S	S		S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		V	S	L	T	H	E	A	F	G	Q	R	A	L	V	V	E	I	M	A	E	G	M	R	N	P	Q	V	A	A	M	L	K	N	K	H	M	T	I	T	E	F	V	A	Q	R	M	R	D	A	Q	Q	K	G	E	I	S	P	D	I	N	T	A	M	T	S	R	L	L	L	D	L	T	Y	G	V	L	.	A	D	I
Query Conservation																																																																														.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.																																										.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	T	L	A	E	N	V	S	R	P	E	L	L	L	L	I	D	A	P	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	F	L	N	A	W	R	T	V	N	H	Q	W	I	P	D	T	D	D	L	E	N	D	A	H	K	R	A	V	Y	L	V	Q	L	A	A	D	G	L	F	V	H	D	Y
Template Known Secondary structure								S												G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.							T					T	T	T	S					S		S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.														.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	E	D	L	A	R	E	A	S	F	A	Q	G	L	R	A	M	I	G	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	H	D	D	V	L	S	K	S	K	R	Q	A	X	L	E	T	I	L	E	L	I
Template Known Secondary structure			S	S																		T
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions