Job Description P0ACT6 Confidence 99.75% Date Thu Jan 5 11:19:01 GMT 2012 Rank 114 Aligned Residues 188 % Identity 15% Template c2y31A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative repressor simreg2; PDBTitle: simocyclinone c4 bound form of tetr-like repressor simr Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	M	Q	T	E	A	Q	P	T	R	T	R	I	L	N	A	A	R	E	I	F	S	E	N	G	F	H	S	A	S	M	K	A	I	C	K	S	C	A	I	S	P	G	T	L	Y	H	H	F	I	S	K	E	A	L	I	Q	A	I	I	L	Q	D	Q	E	R	A	L	A	R	F	R	E	P	I	E	G	I	H
Query Conservation
Alig confidence																																																																						.	.	.	.
Template Conservation																																																																						.	.	.	.
Template Sequence		R	S	A	R	S	H	R	T	L	S	R	D	Q	I	V	R	A	A	V	K	V	A	D	T	E	G	V	E	A	A	S	M	R	R	V	A	A	E	L	G	A	G	T	M	S	L	Y	Y	Y	V	P	T	K	E	D	L	V	E	L	M	V	D	E	V	I	G	E	T	.	.	.	.	R	L	P	D	R	P	G	P
Template Known Secondary structure				T	T		S	S		B																		S	T	T											T							T	T	T			S														T	T		.	.	.	.				S	S			S
Template Predicted Secondary structure																																																																						.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.					.	.	.	90	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																							.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	V	D	Y	M	V	E	S	I	V	S	L	T	H	E	A	F	G	Q	R	A	L	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	M	A	E	G	M	R	N	P	Q	V	A	A	M	L	K	N	K	H	M	T	I	T	E	F	V	A	Q	R	M	R	D	A
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	W	R	A	A	L	T	L	A	A	N	E	K	R	A	L	W	L	R	H	P	W	L	A	T	A	W	R	N	G	H	P	V	W	G	P	N	S	L	R	Q	Q	E	F	V	L	G	T	L	G	V	F	D	L	Q	V	D	E	L	L	S	L	I	G	L	Y	N	G	Y	V	E	S	F	V	R	N	E	V	G	W
Template Known Secondary structure																					S	G	G	G	G	T	S				S	S				S													T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.												.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	Q	K	G	E	I	S	P	D	I	N	T	A	M	T	S	R	L	L	L	D	L	.	.	.	.	.	.	.	.	.	.	.	T	Y	G	V	L	A	D	I	E	A	E	D	L	A	R	E	A	S	F	A	Q	G	L	R	A	M	I	G	G	I	L	T
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	E	A	R	R	T	K	V	D	M	R	E	W	M	R	R	S	G	P	Y	A	Q	Q	L	V	D	S	G	E	Y	P	M	F	A	R	V	L	A	E	T	V	A	P	H	M	G	P	D	Q	R	F	R	S	G	L	E	R	L	L	D	S	I	G	A
Template Known Secondary structure									S										T										T	S	S													G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions