Job Description P0ACT6 Confidence 99.88% Date Thu Jan 5 11:19:01 GMT 2012 Rank 57 Aligned Residues 183 % Identity 11% Template c2qtqB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of a predicted dna-binding transcriptional regulator2 (saro_1072) from novosphingobium aromaticivorans dsm at 1.85 a3 resolution Resolution 1.85 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		T	R	T	R	I	L	N	A	A	R	E	I	F	S	E	N	G	F	H	S	A	S	M	K	A	I	C	K	S	C	A	I	S	P	G	T	L	Y	H	H	F	I	S	K	E	A	L	I	Q	A	I	I	L	Q	D	Q	E	R	A	L	A	R	F	R	E	P	I	E	G	I	H	.	F	V	D	Y	M	V	E	S
Query Conservation																																																																									.
Alig confidence																																																																									.
Template Conservation
Template Sequence		A	R	D	L	L	L	Q	T	A	S	N	I	X	R	E	G	D	V	V	D	I	S	L	S	E	L	S	L	R	S	G	L	N	S	A	L	V	K	Y	Y	F	G	N	K	A	G	L	L	K	A	L	L	D	R	D	X	E	N	I	V	K	S	V	D	A	L	L	A	K	D	D	X	S	P	E	A	K	L	R	R
Template Known Secondary structure																		T		S												T											S	S																									S			S	S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		I	V	S	L	T	H	E	A	F	G	Q	R	A	L	V	V	E	I	M	A	E	G	.	.	.	M	R	N	P	Q	V	A	A	M	L	K	N	K	H	M	T	I	T	E	F	V	A	Q	R	M	R	D	A	Q	Q	K	G	E	I	S	P	D	I	N	T	A	M	T	S	R	L	L	L	D	L	T	Y	G	V	L
Query Conservation																								.	.	.
Alig confidence																								.	.	.																																				.
Template Conservation																																																														.
Template Sequence		H	I	S	K	C	I	D	T	Y	Y	D	Y	P	Y	L	N	R	L	L	X	R	L	V	R	D	S	D	E	A	E	A	K	R	I	A	D	Q	Y	L	L	P	L	H	R	A	Y	N	R	F	I	G	E	G	V	K	A	G	V	F	R	.	P	I	N	P	Q	L	F	Y	F	T	V	T	G	A	A	D	R	F	F
Template Known Secondary structure														T	T																									T																	T	T	S	B		.													T
Template Predicted Secondary structure																																																														.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		168							.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.
Query Sequence		A	.	.	.	.	.	.	D	I	E	A	E	D	L	A	R	E	A	S	F	A	Q	G	L	R	A	M	I	G	G	I	L	T	A
Query Conservation			.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.
Template Conservation
Template Sequence		S	A	R	L	V	L	K	H	C	F	D	Q	D	T	L	T	E	Q	L	R	D	S	Y	R	E	H	T	V	D	F	I	X	A	G
Template Known Secondary structure											S			S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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