Job Description P0ACT6 Confidence 99.94% Date Thu Jan 5 11:19:01 GMT 2012 Rank 1 Aligned Residues 191 % Identity 12% Template c2pbxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:hemagglutinin/protease regulatory protein; PDBTitle: vibrio cholerae hapr Resolution 2.20 Å

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		1	.	.	.	.	.	.	.			.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		M	M	D	N	M	Q	T	E	.	.	A	Q	P	T	R	T	R	I	L	N	A	A	R	E	I	F	S	E	N	G	F	H	S	A	S	M	K	A	I	C	K	S	C	A	I	S	P	G	T	L	Y	H	H	F	I	S	K	E	A	L	I	Q	A	I	I	L	Q	D	Q	E	R	A	L	A	R	F	R	E	P	I
Query Conservation										.	.
Alig confidence										.	.
Template Conservation
Template Sequence		I	E	K	R	P	R	T	R	L	S	P	Q	K	R	K	L	Q	L	M	E	I	A	L	E	V	F	A	K	R	G	I	G	R	G	G	H	A	D	I	A	E	I	A	Q	V	S	V	A	T	V	F	N	Y	F	P	T	R	E	D	L	V	D	D	V	L	N	F	V	V	R	Q	Y	S	N	F	L	T	D	H	I
Template Known Secondary structure																																T	T	S											T	S										S	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		E	G	I	H	F	V	D	Y	M	V	E	S	I	V	S	L	T	H	E	A	F	G	Q	R	A	L	V	V	E	I	M	A	E	.	.	G	M	R	N	P	Q	V	A	A	M	L	K	N	K	H	M	T	I	T	E	F	V	A	Q	R	M	R	D	A	Q	Q	K	G	E	I	S	P	D	I	N	T	A	M	T	S
Query Conservation																																			.	.
Alig confidence																																			.	.
Template Conservation
Template Sequence		D	L	D	L	D	V	K	T	N	L	Q	T	L	C	K	E	M	V	K	L	A	M	T	D	C	H	W	L	K	V	W	F	E	W	S	A	S	T	R	D	E	V	W	P	L	F	V	S	T	N	R	T	N	Q	L	L	I	R	N	M	F	M	K	A	M	E	R	G	E	L	C	E	K	H	D	V	D	N	M	A
Template Known Secondary structure			T	T	S																		T	T	T												T				T	T	T								T																	T	T		S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	L	L	D	L	T	Y	G	V	L	A	D	I	E	A	E	D	L	A	R	E	A	S	F	A	Q	G	L	R	A	M	I	G	G	I	L
Query Conservation
Alig confidence																				.	.
Template Conservation																				.	.
Template Sequence		S	L	F	H	G	I	F	Y	S	I	F	L	Q	V	N	R	L	G	.	.	E	Q	E	A	V	Y	K	L	A	D	S	Y	L	N	M	L	C
Template Known Secondary structure																		T		.	.															T
Template Predicted Secondary structure																				.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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