Job Description P0ACT6 Confidence 99.89% Date Thu Jan 5 11:19:01 GMT 2012 Rank 45 Aligned Residues 185 % Identity 15% Template c2o7tA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of a tetr family transcriptional regulator2 (ncgl1578, cgl1640) from corynebacterium glutamicum at 2.10 a3 resolution Resolution 2.10 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	E	A	Q	P	T	R	T	R	I	L	N	A	A	R	E	I	F	S	E	N	G	F	H	S	A	S	M	K	A	I	C	K	S	C	A	I	S	P	G	T	L	Y	H	H	F	I	S	K	E	A	L	I	Q	A	I	I	L	Q	D	Q	E	R	A	L	A	R	F	R	E	P	I	E	G	I	H	F	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	D	A	L	K	R	R	E	H	I	I	T	T	T	C	N	L	Y	R	T	H	H	H	D	S	L	T	X	E	N	I	A	E	Q	A	G	V	G	V	A	T	L	Y	R	N	F	P	D	R	F	T	L	D	X	A	C	A	Q	Y	L	F	N	V	V	I	S	L	Q	L	Q	A	I	S	T	F	P	T	D	P
Template Known Secondary structure																							S		G	G	G											T											S	S																											G	G	G
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	M	V	E	S	I	V	S	L	T	H	E	A	F	G	Q	R	A	L	V	V	E	I	M	A	E	G	M	R	N	P	Q	V	A	A	M	L	K	N	K	H	M	T	I	T	E	F	V	A	Q	R	M	R	D	A	Q	Q	K	G	E	I	S	P	D	I	N	T	A	M	T	S	R	L	L	L	D	L	T	Y	G
Query Conservation
Alig confidence			.	.
Template Conservation			.	.
Template Sequence		E	.	.	G	V	W	T	S	F	N	Q	L	L	F	D	R	G	L	G	S	L	V	P	A	L	A	P	E	S	L	D	D	L	P	D	E	V	S	A	L	R	R	T	T	E	K	N	T	T	T	L	I	N	L	A	K	Q	H	G	L	V	H	H	D	I	A	P	G	T	Y	I	V	G	L	I	T	I	S	R	P
Template Known Secondary structure			.	.													T	T											S	S	G	G	G	S																									T	T	S	S		T	T														T	S
Template Predicted Secondary structure			.	.
Template SS confidence
		82			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	A	D	I	E	A	E	D	L	A	R	E	A	S	F	A	Q	G	L	R	A	M	I	G	G	I	L	T	A
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	P	I	T	A	L	A	T	I	S	E	N	S	H	K	A	L	L	G	L	Y	L	S	G	L	K	H	G
Template Known Secondary structure		.	.	.			G	G	G			S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions