Job Description P0ACT6 Confidence 99.88% Date Thu Jan 5 11:19:01 GMT 2012 Rank 53 Aligned Residues 181 % Identity 19% Template c2np5A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of a transcriptional regulator (rha1_ro04179) from2 rhodococcus sp. rha1. Resolution 1.80 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	T	R	I	L	N	A	A	R	E	I	F	S	E	N	G	F	H	S	A	S	M	K	A	I	C	K	S	C	A	I	S	P	G	T	L	Y	H	H	F	I	S	K	E	A	L	I	Q	A	I	I	L	Q	D	Q	E	R	A	L	A	R	F	R	E	P	I	E	G	I	H	F	V	D	Y	M	V	E	S	I
Query Conservation
Alig confidence																																																																							.
Template Conservation																																																																							.
Template Sequence		S	P	E	R	L	A	A	A	L	F	D	V	A	A	E	S	G	L	E	G	A	S	V	R	E	V	A	K	R	A	G	V	S	I	G	A	V	Q	H	H	F	S	T	K	D	E	X	F	A	F	A	L	R	T	L	V	D	K	L	L	A	R	L	S	E	V	E	R	G	.	G	D	P	A	R	A	L	F	A	A
Template Known Secondary structure																			G	G	G											T											S	S																						T	S			T	.	T
Template Predicted Secondary structure																																																																							.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		V	S	L	T	H	E	A	F	G	Q	R	A	L	V	V	E	I	M	A	E	G	M	R	N	P	Q	V	A	A	M	L	K	N	K	H	M	T	I	T	E	F	V	A	Q	R	M	R	D	A	Q	Q	K	G	E	I	S	P	D	I	N	T	A	M	T	S	R	L	L	L	D	L	T	Y	G	V	L	A	D	I	.
Query Conservation																																																																																	.
Alig confidence																																																										.	.	.																					.
Template Conservation																																																										.	.	.
Template Sequence		X	S	Q	L	L	P	L	D	E	A	R	S	R	E	A	H	V	X	A	A	F	A	V	R	A	A	T	S	P	S	L	A	E	I	R	R	K	T	L	F	T	I	R	T	G	L	S	A	V	L	I	G	I	G	T	P	.	.	.	E	A	E	T	R	A	A	L	L	L	A	T	V	D	G	L	A	L	D	A	I
Template Known Secondary structure				T	T	S			S																		T	T																									T	T	T		T	.	.	.	T
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	E	D	L	A	R	E	A	S	F	A	Q	G	L	R	A	M	I	G	G	I	L	T	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	P	A	L	Y	P	P	E	Y	L	E	H	A	L	D	I	Q	I	G	X	I	L	Q	G	A
Template Known Secondary structure				G	G	G	S																	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions