Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACT6
Confidence99.88%DateThu Jan 5 11:19:01 GMT 2012
Rank52Aligned Residues179
% Identity15%Templatec2fq4A_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: the crystal structure of the transcriptional regulator (tetr family)2 from bacillus cereus
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.........80.......
Predicted Secondary structure 

















Query SS confidence 















































































Query Sequence  EAQPTRTRILNAAREIFSENGFHSASMKAICKSCAISPGTLYHHFISKEALIQAIILQDQERALARFREPIEGIHFVDYM
Query Conservation      

  

 

  
    
    

  

  



  
 
  
  
  
                             
Alig confidence 





























































....













Template Conservation 
   

  

 

  
    
    

  

  



  


  
 


 
           ....              
Template Sequence  RNIETQKAILSASYELLLESGFKAVTVDKIAERAKVSKATIYKWWPNKAAVVXDGFLSAAAA. . . . RLPVPDTGSALNDI
Template Known Secondary structure 


TTT

T


SSS

....






S
Template Predicted Secondary structure 

















....




Template SS confidence 















































































   910.........20.........30.........40.........50.........60.........70 .........80....
 
   88.90.........100.........110. ........120.........130.........140.........150.........160.....
Predicted Secondary structure 


..











Query SS confidence 























. .





















































Query Sequence  VESIVSLTHEAFGQRALVVEIMAE. . GMRNPQVAAMLKNKHMTITEFVAQRMRDAQQKGEISPDINTAMTSRLLLDLTYG
Query Conservation                          ..                         
                            
Alig confidence 























..



















































..
Template Conservation                                                     
      
                   ..
Template Sequence  LIHATSLANFLISREGTIINELVGEGQFDSKLAEEYRVRYFQPRRLQAKQLLEKGIKRGELKENLDIELSIDLIYGPI. .
Template Known Secondary structure  STTTTTT
TTT
S
TT

..
Template Predicted Secondary structure 














..
Template SS confidence 















































































   85....90.........100.........110.........120.........130.........140.........150.........160..
 
   166...170.........180.........190..
Predicted Secondary structure 





Query SS confidence 


























Query Sequence  VLADIEAEDLAREASFAQGLRAMIGGI
Query Conservation                         
 

Alig confidence 


























Template Conservation                         
 

Template Sequence  FYRLLVTGEKLDDSYVHDLVINAFEGI
Template Known Secondary structure  TT





S
Template Predicted Secondary structure 






Template SS confidence 


























   163......170.........180.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions