Return to main results Retrieve Phyre Job Id

Job DescriptionP38683
Confidence98.06%DateThu Jan 5 11:58:14 GMT 2012
Rank89Aligned Residues204
% Identity10%Templated1jdpa_
SCOP infoPeriplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  AKRAWKLCALYP. . SLKDSYWLSLNYGMQEAARR. . . . . . . YGVDLKVLEAGGYSQLATQQAQIDQCKQW. . . GAEAIL.
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Template Sequence  PPQKIEVLVLLPQDDSYLFSLTRVRPAIEYALRSVEGRLLPPGTRFQVAYEDSDCGNRALFSLVDRVAAARGAKPDLILG
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   108.110.........120.........130 .........140.........150.........160.........170.........
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Query Sequence  . LGSSTTSFPDLQKQVASLPVIEL. . . . . . . VNAIDAPQVKSRVGVPWFQMGYQPGRYLVQWAHGKPLNVLLMPGPDNAG
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Template Sequence  PVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPAYAKMGEMMLALFRHHHWSR. . AALVYSDDKLER
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   8990.........100.........110.........120.........130.........140.........150.... .....160......
 
   180.........190.........200.........210.........220.........230.........240........
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Query Sequence  GSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAMGEGRNLKT
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Template Sequence  NCYFTLEGVHEVFQEEGLHTSIYSFDETKDLDLEDIVRNIQASERV. . VIMCASSDTIRSIMLVAHRHG
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   167..170.........180.........190.........200.........210.. .......220.........230...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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