 |
Job Description | P38683 | Confidence | 75.11% | Date | Thu Jan 5 11:58:14 GMT 2012 |
Rank | 156 | Aligned Residues | 74 |
% Identity | 12% | Template | d1c41a_ |
SCOP info | Lumazine synthase
| Lumazine synthase
| Lumazine synthase
|
Resolution | 3.10 |
|
 |
  |   |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
|
|
. | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | |
|
|
|
. | . | . | . | 100 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | S | T | P | L | K | A | K | R | A | W | K | L | C | A | L | Y | P | S | L | K | D | S | Y | W | L | S | L | N | Y | G | M | Q | E | A | A | R | R | Y | G | V | D | . |
. |
. |
L | K | V | L | E | A | G | G | Y | S | Q | L | A | T | Q | Q | A | Q | I | . |
. |
. |
. |
D | Q | C | K | Q | W | G | A | E | A | I | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
| . | . | . | . |   |   |   |
|   |   |   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|   |   |   |   |
|
|
|
|
|   |
|
|
|
|   |   |
|   |   |   |
|
|   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|   |   |
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|
|
|
|
|
Template Sequence |   |
P | T | P | Q | Q | H | D | G | S | A | L | R | I | G | I | V | H | A | R | W | N | E | T | I | I | E | P | L | L | A | G | T | K | A | K | L | L | A | C | G | V | K | E | S | N | I | V | V | Q | S | V | P | G | S | W | E | L | P | I | A | V | Q | R | L | Y | S | A | S | Q | L | Q | S | T | G | P | F | D | A | L | I |
Template Known Secondary structure |   |
|
|
|
|
|
|
|
| S | S |
|
|  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| G | G | G |  |  |  |  |  |  | S | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| S |
|
| S |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
  |
  |   |
108 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
L |
Query Conservation |   |
|
Alig confidence |   |
|
Template Conservation |   |
  |
Template Sequence |   |
A |
Template Known Secondary structure |   |
 |
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
116 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|