Job Description P38683 Confidence 93.36% Date Thu Jan 5 11:58:14 GMT 2012 Rank 117 Aligned Residues 211 % Identity 12% Template c3na8A_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of a putative dihydrodipicolinate synthetase from2 pseudomonas aeruginosa Resolution 1.85 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		L	E	A	G	G	Y	S	Q	L	A	T	Q	Q	A	Q	I	D	Q	C	K	Q	W	G	A	E	A	I	L	L	G	S	S	T	T	S	F	P	D	L	Q	K	Q	V	A	S	L	P	V	I	E	L	V	N	A	I	D	A	.	P	Q	V	K	S	R	V	G	V	P	W	F	Q	M	G	Y	Q	P	G	R	Y	L
Query Conservation																																																											.
Alig confidence																																																											.
Template Conservation
Template Sequence		F	A	A	D	G	G	L	D	L	P	A	L	G	R	S	I	E	R	L	I	D	G	G	V	H	A	I	A	P	L	G	S	T	G	E	G	A	Y	L	S	D	P	E	W	D	E	V	V	D	F	T	L	K	T	V	A	H	R	V	P	T	I	V	S	V	S	D	L	T	T	A	K	T	V	R	R	A	Q	F	A
Template Known Secondary structure		B		T	T	S	S	B															T	T		S					S	S	G	G	G	T	G	G	G	S																	T	T	S	S		B							S	S
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		V	Q	W	A	H	G	K	P	L	N	V	L	L	M	P	G	P	D	N	A	G	G	S	K	E	M	V	E	G	F	R	A	A	I	A	G	S	P	V	R	I	V	D	I	A	L	G	D	.	N	D	I	E	I	Q	R	N	L	L	Q	E	M	L	E	R	H	P	E	I	D	V	V	A	G	T	A	I	A	A	E
Query Conservation																																																		.
Alig confidence									.	.	.																																							.
Template Conservation									.	.	.
Template Sequence		E	S	L	G	A	E	A	.	.	.	V	X	V	L	P	I	S	Y	W	K	L	N	E	A	E	V	F	Q	H	Y	R	A	V	G	E	A	I	G	V	P	V	X	L	Y	N	N	P	G	T	S	G	I	D	X	S	V	E	L	I	L	R	I	V	R	E	V	D	N	V	T	X	V	K	E	S	T	G	D	I	Q
Template Known Secondary structure				T	T		S		.	.	.								S	S																			S	S												S															S	T	T								S	S
Template Predicted Secondary structure									.	.	.
Template SS confidence
		116	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	M	G	E	G	R	N	L	K	T	P	L	T	V	V	S	F	Y	L	S	H	Q	V	Y	R	G	L	K	R	G	R	V	I	M	A	A	S	D	Q	M	V	W	Q	G	E	L	A	V	E	Q	A	I	R	Q	L	Q	G	Q
Query Conservation
Alig confidence																							.	.										.
Template Conservation																							.	.										.
Template Sequence		R	X	H	K	L	R	L	L	G	E	G	R	V	P	F	Y	N	G	N	P	L	.	.	A	L	E	A	F	V	A	G	A	.	K	G	W	C	S	A	A	P	N	L	I	P	T	L	N	G	Q	L	Y	Q	A	V	L	D	G	D
Template Known Secondary structure										T	T	T		S							T	T	.	.								T		.	S					S	G	G	G	T														T	T
Template Predicted Secondary structure																							.	.										.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.			.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions