Job Description P38683 Confidence 21.33% Date Thu Jan 5 11:58:14 GMT 2012 Rank 219 Aligned Residues 83 % Identity 13% Template c3ir1F_ PDB info PDB header:protein binding Chain: F: PDB Molecule:outer membrane lipoprotein gna1946; PDBTitle: crystal structure of lipoprotein gna1946 from neisseria2 meningitidis Resolution 2.15 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	W	K	L	C	A	L	Y	P	S	L	K	D	S	Y	W	L	S	L	N	Y	G	M	Q	E	A	A	R	R	Y	G	V	D	L	K	V	L	E	A	G	G	Y	S	Q	L	A	T	Q	Q	A	Q	I	D	Q	C	K	Q	W	G	A	E	A	I	L	L	G	S	S	T	T	S	F	P	D	L	Q	K	Q	V
Query Conservation
Alig confidence												.	.	.	.																														.	.	.	.	.	.																					.	.
Template Conservation												.	.	.	.																														.	.	.	.	.	.																					.	.
Template Sequence		K	E	I	V	F	G	T	T	V	G	.	.	.	.	D	F	G	D	M	V	K	E	Q	I	Q	P	E	L	E	K	K	G	Y	T	V	K	L	V	E	F	T	D	Y	.	.	.	.	.	.	V	R	P	N	L	A	L	A	E	G	E	L	D	I	N	V	F	Q	H	K	.	.	P	Y	L	D	D	F	K	K	E
Template Known Secondary structure										S	S	.	.	.	.									T							T	T	T									S	S	S	.	.	.	.	.	.	S									T	S		S								.	.
Template Predicted Secondary structure												.	.	.	.																														.	.	.	.	.	.																					.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.					.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.							.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	L	P	V	I	E	L	V	N	A	I	D	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	N	L	D	I	T	E	V	F	Q	V	P	T	A	P
Template Known Secondary structure														B
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions