Job Description P38683 Confidence 99.95% Date Thu Jan 5 11:58:14 GMT 2012 Rank 61 Aligned Residues 254 % Identity 11% Template c3huuC_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:transcription regulator like protein; PDBTitle: crystal structure of transcription regulator like protein from2 staphylococcus haemolyticus Resolution 1.95 Å

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		43	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.
Query SS confidence													.	.	.	.	.
Query Sequence		R	A	W	K	L	C	A	L	Y	P	S	.	.	.	.	.	L	K	D	S	Y	W	L	S	L	N	Y	G	M	Q	E	A	A	R	R	Y	G	V	D	L	K	V	L	E	A	G	G	Y	S	Q	L	A	T	Q	Q	A	Q	I	D	Q	C	K	Q	W	G	A	E	A	I	L	L	G	S	S	T	T	S	F	P	D
Query Conservation													.	.	.	.	.
Alig confidence													.	.	.	.	.																												.	.
Template Conservation																																													.	.
Template Sequence		K	T	L	T	I	G	L	I	Q	K	S	S	A	P	E	I	R	Q	N	P	F	N	S	D	V	L	N	G	I	N	Q	A	C	N	V	R	G	Y	S	T	R	M	T	.	.	V	S	E	N	S	G	D	L	Y	H	E	V	K	T	M	I	Q	S	K	S	V	D	G	F	I	L	L	Y	S	L	K	D	D	P	I
Template Known Secondary structure											S								T	S																	T	T							.	.			S	S														T	T			S					S	S		B	T	T
Template Predicted Secondary structure																																													.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	K	Q	V	A	S	L	P	V	I	E	L	V	N	A	I	D	A	P	Q	V	K	S	R	V	G	V	P	W	F	Q	M	G	Y	Q	P	G	R	Y	L	V	Q	W	A	H	G	K	P	L	N	V	L	L	M	P	G	P	D	N	A	G	G	S	K	E	M	V	E	G	F	R	A	A	I	A	G	S	P	V
Query Conservation
Alig confidence																																																		.	.	.
Template Conservation																																																		.	.	.
Template Sequence		E	H	L	L	N	E	F	K	V	P	Y	L	I	V	G	K	S	L	N	Y	E	N	I	I	H	I	D	N	D	N	I	D	A	A	Y	Q	L	T	Q	Y	L	Y	H	L	G	H	R	H	.	.	.	I	L	F	L	Q	E	S	G	H	Y	A	V	T	E	D	R	S	V	G	F	K	Q	Y	C	D	D	V	K	I
Template Known Secondary structure								T	T							S				S		S	S																							T				.	.	.							S	S		B																	T	T
Template Predicted Secondary structure																																																		.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.								.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																																																	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.
Query Sequence		R	I	V	D	I	A	L	G	D	N	D	I	E	I	Q	R	N	L	L	Q	E	M	L	E	R	H	P	E	I	D	V	V	A	G	T	A	I	A	A	E	A	A	M	G	E	G	R	.	.	.	.	.	.	.	N	L	K	T	P	L	T	V	V	S	F	Y	L	S	H	Q	V	Y	R	G	L	K	R	G	R	V
Query Conservation																																																	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.																				.	.	.												.	.	.	.	.	.	.																			.	.	.
Template Conservation										.	.	.	.	.	.																				.	.	.																																					.	.	.
Template Sequence		S	N	D	C	V	V	I	K	.	.	.	.	.	.	S	M	N	D	L	R	D	F	I	K	Q	Y	M	P	S	V	I	I	T	.	.	.	S	D	V	M	L	N	M	Q	L	L	N	V	L	Y	E	Y	Q	L	R	I	P	E	D	I	Q	T	A	T	F	N	T	S	F	L	T	E	.	.	.	N	A	T	P	S
Template Known Secondary structure										.	.	.	.	.	.	S									T	T				S					.	.	.	S	S														T	T			T	T	T	T							S		S					.	.	.	T	S	S	S
Template Predicted Secondary structure										.	.	.	.	.	.																				.	.	.																																					.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.							.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.				.	.	.	240	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	A	A	S	D	Q	M	V	W	Q	G	E	L	A	V	E	Q	A	I	R	Q	L	Q	G	Q	S	V	S	D	N	V	S	P	P	I	L	V	L	T	P	K	N	A	D	R
Query Conservation
Alig confidence																											.	.	.
Template Conservation																											.	.	.
Template Sequence		Q	T	S	V	N	I	N	P	D	V	L	G	F	T	A	G	N	T	I	I	D	V	L	R	N	.	.	.	F	R	E	K	L	I	S	T	Q	I	V	E	R	V	S	T	T	K
Template Known Secondary structure																								T	T		.	.	.														T	T
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.				.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions