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Job Description | P38683 | Confidence | 25.80% | Date | Thu Jan 5 11:58:14 GMT 2012 |
Rank | 209 | Aligned Residues | 87 |
% Identity | 14% | Template | c2ov3A_ |
PDB info |
PDB header:transport protein | Chain: A: PDB Molecule:periplasmic binding protein component of an abc |
PDBTitle: crystal structure of 138-173 znua deletion mutant plus zinc2 bound
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Resolution | 2.40 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
A | R | R | Y | G | V | D | L | K | V | L | E | A | G | G | Y | S | Q | L | A | T | Q | Q | A | Q | I | D | Q | C | K | Q | . |
W | G | A | E | A | I | L | L | G | S | S | . |
T | T | S | F | P | D | L | Q | K | Q | V | A | S | L | P | V | I | E | L | V | N | A | I | D | A | P | Q | V | K | S | R | V | G | V | P | W |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | R | D | Y | N | L | V | Q | I | P | I | E | V | E | G | Q | E | P | S | A | Q | E | L | K | Q | L | I | D | T | A | K | E | N | N | L | T | M | V | F | G | E | T | Q | F | S | T | K | S | S | E | A | I | A | A | E | I | G | A | G | V | E | L | L | D | P | L | . |
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A | A | D | W |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | |
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148 | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
F | Q | M | G | Y | Q | P | G | R | Y | L | V | Q | W | A | H | G | K | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | S | N | L | K | A | V | A | Q | K | I | A | N | A | N | S | A | Q | P |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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