Job Description P38683 Confidence 92.13% Date Thu Jan 5 11:58:14 GMT 2012 Rank 125 Aligned Residues 162 % Identity 14% Template c2dgdD_ PDB info PDB header:lyase Chain: D: PDB Molecule:223aa long hypothetical arylmalonate decarboxylase; PDBTitle: crystal structure of st0656, a function unknown protein from2 sulfolobus tokodaii Resolution 2.90 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																																																				.	.	.														.
Query SS confidence																																																				.	.	.														.
Query Sequence		K	L	C	A	L	Y	P	S	L	K	D	S	Y	W	L	S	L	N	Y	G	M	Q	E	A	A	R	R	Y	G	V	D	L	K	V	L	E	A	G	G	Y	S	Q	L	A	T	Q	Q	A	Q	I	.	.	.	D	Q	C	K	Q	W	G	A	E	A	I	L	L	.	G	S	S	T	T	S	F	P	D	L	Q	K	Q
Query Conservation																																																				.	.	.														.
Alig confidence																																																				.	.	.														.
Template Conservation
Template Sequence		R	I	G	V	I	L	P	A	N	N	A	G	X	E	Y	D	L	W	K	X	A	P	E	G	V	S	I	H	S	T	R	X	K	P	T	K	G	C	E	P	E	N	V	E	E	F	E	K	E	L	K	Y	S	Y	S	L	L	A	E	V	S	D	I	I	I	Y	G	R	T	Y	G	T	H	K	H	A	H	V	I	K
Template Known Secondary structure									T	T			S											T	T												S	S	S	S		S	S																T	T	T		S								T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		V	A	S	L	P	V	I	E	L	V	N	A	I	D	A	P	Q	V	K	S	R	V	G	V	P	W	F	Q	M	G	Y	Q	P	G	R	Y	L	V	Q	W	A	H	G	K	P	L	N	V	L	L	M	P	G	P	D	N	A	G	G	S	K	E	M	V	E	G	F	R	A	A	I	A	G	S	P	V	R	I	.	.
Query Conservation																																																																																.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.										.	.	.	.	.																			.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.										.	.	.	.	.
Template Sequence		R	V	I	K	D	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	E	E	S	V	Y	E	L	L	K	K	L	N	V	R	.	.	K	L	W	I	G	T	P	Y	I	.	.	.	.	.	K	E	R	T	L	E	E	V	E	W	W	R	N	K	G	F	E	I	V	G
Template Known Secondary structure				S	T	T		B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T			.	.							S	S		.	.	.	.	.													T	T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.										.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.																						.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.						.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
									200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	V	D	I	A	L	G	D	N	D	I	E	I	Q	R	N	L	L	Q	E	M	L	E	R	H	P	E	I	D	V	V	A	G	T	A	I	A
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	D	G	L	G	K	I	R	G	I	D	I	S	N	T	P	I	F	T	I	Y	R	L	V	K	R	H	L	N	E	V	L	K	A	D	A	V	Y	I	A	C	T	A
Template Known Secondary structure									S						T												T	T					T	T	S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions